Miyakogusa Predicted Gene
- Lj4g3v1598230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1598230.1 Non Chatacterized Hit- tr|I3SAA0|I3SAA0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.64,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; BASIC,CUFF.49444.1
(663 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO013212 UniRef100_Q0D801 Cluster: Os07g0193800 protein... 743 0.0
gnl|LJGI|TC80652 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 345 2e-94
gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 337 5e-92
gnl|LJGI|AU089082 homologue to UniRef100_A9TUF1 Cluster: Predict... 149 3e-35
gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome... 74 1e-12
>gnl|LJGI|GO013212 UniRef100_Q0D801 Cluster: Os07g0193800 protein; n=1; Oryza sativa
Japonica Group|Rep: Os07g0193800 protein - Oryza sativa
subsp. japonica (Rice), partial (15%)
Length = 637
Score = 743 bits (375), Expect = 0.0
Identities = 381/383 (99%)
Strand = Plus / Plus
Query: 1 atggaccctcccctcttcaacgactccacattctcctccgccaacccctccttgtctgaa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atggaacctcccctcttcaacgactccacattctcctccgccaacccctccttgtctgaa 314
Query: 61 atttggcctccggaccccgaccccaccaccagctccaccctccttcctccgcgccggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atttggcctccggaccccgaccccaccaccagctccaccctccttcctccgcgccggaaa 374
Query: 121 agaaacctccctcccttctcctcctcgaatgatagttgcggcaataagcatgtgaagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agaaacctccctcccttctcctcctcgaatgatagttgcggcaataagcatgtgaagttg 434
Query: 181 ggagattccgtggatgagttgaaaggtgagccagagaaacaaccaccttctccgccgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggagattccgtggatgagttgaaaggtgagccagagaaacaaccaccttctccgccgcct 494
Query: 241 ccgccgccgcctaagcaagactacatacacgtcagagccagaaggggacaagccaccgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccgccgccgcctaagcaagactacatacacgtcagagccagaaggggacaagccaccgat 554
Query: 301 agtcacagtctcgctgagagagccagaagagaaaagatcagtgagagaatgaaaattctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 555 agtcacagtctcgctgagagagccagaagagaaaagatcagtgagagaatgaagattctt 614
Query: 361 caagatttagtccctggatgcaa 383
|||||||||||||||||||||||
Sbjct: 615 caagatttagtccctggatgcaa 637
>gnl|LJGI|TC80652 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (63%)
Length = 1194
Score = 345 bits (174), Expect = 2e-94
Identities = 333/386 (86%)
Strand = Plus / Plus
Query: 250 cctaagcaagactacatacacgtcagagccagaaggggacaagccaccgatagtcacagt 309
|||||||||||||| || || || || || |||||||| ||||| || ||||| |||||
Sbjct: 417 cctaagcaagactatattcatgtgagggcaagaagggggcaagctacagatagccacagc 476
Query: 310 ctcgctgagagagccagaagagaaaagatcagtgagagaatgaaaattcttcaagattta 369
| || |||||||| ||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 477 atagcagagagagctagaagggaaaagatcagtgagaggatgaaaattcttcaggatttg 536
Query: 370 gtccctggatgcaacaaggtgattggtaaagcacttgtactggatgagataatcaattac 429
||||| || || |||||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 537 gtccccgggtgtaacaagatgattggtaaagcacttgttctggatgagataattaattac 596
Query: 430 atacaatcgctgcagcatcaggttgagttcctttcaatgaagcttgaagcagttaattcc 489
|| || |||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 597 atccagtcgctgcagcatcaggttgagttcctatcgatgaagcttgaagcagttaattca 656
Query: 490 agattcaacatgaaccccactattgactgtttttcttcaaaagatgttggtactcaacca 549
||| |||| ||||||| || | ||| | ||| ||||||||||||||| ||| || |||
Sbjct: 657 agagccaacttgaacccaacaaatgaagggtttccttcaaaagatgttgttacccagcca 716
Query: 550 tttgaccttgctggaataatatttggatcacaagcatccaggggttatgcccagggatca 609
|||||| |||||||| | |||| || |||||||||| | ||||| ||||| |||||||||
Sbjct: 717 tttgacattgctggagtgatatatgaatcacaagcagcaagggggtatgctcagggatca 776
Query: 610 cagcctggatggctgcatatgcagat 635
|| |||||||||||||||||||||||
Sbjct: 777 catcctggatggctgcatatgcagat 802
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 atggaccctcccctcttcaacgactccacattctcctccgc 41
||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 69 atggaccctcctctcatcaacgactccacattctcctccgc 109
>gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (58%)
Length = 828
Score = 337 bits (170), Expect = 5e-92
Identities = 329/382 (86%)
Strand = Plus / Plus
Query: 250 cctaagcaagactacatacacgtcagagccagaaggggacaagccaccgatagtcacagt 309
|||||||||||||| || || || ||||| |||||||| ||||| || ||||| |||||
Sbjct: 447 cctaagcaagactatattcatgttagagcaagaagggggcaagctactgatagccacagc 506
Query: 310 ctcgctgagagagccagaagagaaaagatcagtgagagaatgaaaattcttcaagattta 369
| || |||||||| ||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 507 atagcagagagagctagaagggaaaagatcagtgagaggatgaaaattcttcaggatttg 566
Query: 370 gtccctggatgcaacaaggtgattggtaaagcacttgtactggatgagataatcaattac 429
||||| || || |||||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 567 gtccccgggtgtaacaagatgattggtaaagcacttgttctggatgagataattaattac 626
Query: 430 atacaatcgctgcagcatcaggttgagttcctttcaatgaagcttgaagcagttaattcc 489
|| || ||||| |||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 627 atccagtcgctacagcatcaggttgagttcctatcgatgaagcttgaagcagttaattca 686
Query: 490 agattcaacatgaaccccactattgactgtttttcttcaaaagatgttggtactcaacca 549
||| |||||||||||| || | ||| | ||| ||||||||||||||| ||| || |||
Sbjct: 687 agagccaacatgaacccaacaaatgaagggtttccttcaaaagatgttgttacccagcca 746
Query: 550 tttgaccttgctggaataatatttggatcacaagcatccaggggttatgcccagggatca 609
|||||| |||||||| | |||| || |||||| ||| | ||||| ||||| |||||||||
Sbjct: 747 tttgacattgctggagtgatatatgaatcacacgcagcaagggggtatgctcagggatca 806
Query: 610 cagcctggatggctgcatatgc 631
|| |||||||||||||||||||
Sbjct: 807 catcctggatggctgcatatgc 828
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 atggaccctcccctcttcaacgactccacattctcctccgc 41
||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 114 atggaccctcctctcatcaacgactccacattctcctccgc 154
>gnl|LJGI|AU089082 homologue to UniRef100_A9TUF1 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(8%)
Length = 276
Score = 149 bits (75), Expect = 3e-35
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 1 atggaccctcccctcttcaacgactccacattctcctccgccaacccctccttgtctgaa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atggaacctcccctcttcaacgactccacattctcctccgccaacccctccttgtctgaa 249
Query: 61 atttggcctccggaccccgaccc 83
|||||||||||||| ||||||||
Sbjct: 250 atttggcctccggaacccgaccc 272
>gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 581
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 412 gatgagataatcaattacatacaatcgctgcagcatcaggttgagttcctttcaatgaag 471
||||||||||||||||| || ||||| || |||| || ||||||||| | |||||||||
Sbjct: 14 gatgagataatcaattatattcaatcacttcagcgccaagttgagttcttgtcaatgaag 73
Query: 472 cttgaagcagttaattc 488
||||||||||| |||||
Sbjct: 74 cttgaagcagtaaattc 90