Miyakogusa Predicted Gene
- Lj4g3v1561740.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1561740.2 Non Chatacterized Hit- tr|I3SP01|I3SP01_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.18,0,RESPONSE_REGULATORY,Signal transduction response
regulator, receiver domain; TWO-COMPONENT RESPONSE ,CUFF.49431.2
(372 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62739 similar to UniRef100_A7PD82 Cluster: Chromosome... 710 0.0
gnl|LJGI|TC73157 similar to UniRef100_A7PD82 Cluster: Chromosome... 218 2e-56
gnl|LJGI|TC72429 similar to UniRef100_A7Q2K3 Cluster: Chromosome... 74 7e-13
gnl|LJGI|TC66818 homologue to UniRef100_A7QJJ8 Cluster: Chromoso... 66 2e-10
gnl|LJGI|TC57251 similar to UniRef100_A7QJJ8 Cluster: Chromosome... 66 2e-10
>gnl|LJGI|TC62739 similar to UniRef100_A7PD82 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 994
Score = 710 bits (358), Expect = 0.0
Identities = 367/369 (99%), Gaps = 2/369 (0%)
Strand = Plus / Plus
Query: 1 atgggtgctactgccaccggcgaagttttccggcgagtgttggaggattccgatgagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atgggtgctactgccaccggcgaagttttccggcgagtgttggaggattccgatgagctg 110
Query: 61 cacgtgctggctgttgatgacagccttgttgatcgtaaggtcattgagcgtttgctgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cacgtgctggctgttgatgacagccttgttgatcgtaaggtcattgagcgtttgctgaag 170
Query: 121 atttcttcttgcaaagtgacggtggtggatagtggaacacgtgctcttcagtatttgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atttcttcttgcaaagtgacggtggtggatagtggaacacgtgctcttcagtatttgggg 230
Query: 181 ttggatggagaagagaacagttctattggatttgatggtgtgaaggttaatctcataatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttggatggagaagagaacagttctattggatttgatggtgtgaaggttaatctcataatg 290
Query: 241 acggattattccatgcctgggatgacagggtatgaattgctcaagaaaatca--aggagt 298
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 291 acggattattccatgcctgggatgacagggtatgaattgctcaagaaaatcaagaggagt 350
Query: 299 cttctgcttttagagagattccagtggtggtcatgtcatcagagaatatcttgactcgaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cttctgcttttagagagattccagtggtggtcatgtcatcagagaatatcttgactcgaa 410
Query: 359 ttgataggt 367
|||||||||
Sbjct: 411 ttgataggt 419
>gnl|LJGI|TC73157 similar to UniRef100_A7PD82 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 846
Score = 218 bits (110), Expect = 2e-56
Identities = 264/314 (84%), Gaps = 6/314 (1%)
Strand = Plus / Plus
Query: 55 gagctgcacgtgctggctgttgatgacagccttgttgatcgtaaggtcattgagcgtttg 114
|||||||| ||||| |||||||||||||||| ||| || || ||||||||||| || |||
Sbjct: 146 gagctgcatgtgcttgctgttgatgacagccatgtcgaccgcaaggtcattgaacggttg 205
Query: 115 ctgaagatttcttcttgcaaagtgacggtggtggatagtggaacacgtgctcttcagtat 174
|| | || |||||||||||||| || || || ||||||||||| | ||| | ||||||
Sbjct: 206 ctcagaatctcttcttgcaaagttacagttgtagatagtggaaccagagctttgcagtat 265
Query: 175 ttggggttggatggagaagagaacagttctattggatttgatggtgtgaaggttaatctc 234
||||||||||||| || ||| || || ||||| ||||| ||||||||||||||||
Sbjct: 266 ctggggttggatgggga---gaagagctcaattggtcttgatagtgtgaaggttaatctg 322
Query: 235 ataatgacggattattccatgcctgggatgacagggtatgaattgctcaagaaaatca-- 292
|||||||| ||||||||||||||||||||||||||||| ||| || | || ||||| |
Sbjct: 323 ataatgacagattattccatgcctgggatgacagggtacgaactgttgaaaaaaataaag 382
Query: 293 -aggagtcttctgcttttagagagattccagtggtggtcatgtcatcagagaatatcttg 351
||||||| |||| ||| |||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 383 caggagtcatctgttttcagagagattccagtggtggttatgtcttctgagaatatcttg 442
Query: 352 actcgaattgatag 365
|| |||||||||||
Sbjct: 443 acccgaattgatag 456
>gnl|LJGI|TC72429 similar to UniRef100_A7Q2K3 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 486
Score = 73.8 bits (37), Expect = 7e-13
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 252 catgcctgggatgacagggtatgaattgctcaagaaaatcaaggagtcttctgcttttag 311
||||||||| ||||| || |||||||||||||||||||||||||| || || || | ||
Sbjct: 330 catgcctggaatgactggttatgaattgctcaagaaaatcaaggaatcatcatctctcag 389
Query: 312 agagattccagtggtggtcatgtcatcagagaa 344
||| |||||||| ||| ||||||| || |||||
Sbjct: 390 agaaattccagttgtgatcatgtcttctgagaa 422
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 76 gatgacagccttgttgatcgtaaggtcattgagcgtttgctgaagatttc 125
||||||||||| ||||||| ||||||||||| || ||||| ||||||||
Sbjct: 160 gatgacagcctcattgatcgaaaggtcattgaacgcttgctcaagatttc 209
>gnl|LJGI|TC66818 homologue to UniRef100_A7QJJ8 Cluster: Chromosome chr8
scaffold_106, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_106, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (62%)
Length = 878
Score = 65.9 bits (33), Expect = 2e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 253 atgcctgggatgacagggtatgaattgctcaagaaaatcaaggagtcttctgcttttaga 312
|||||||| |||||||| ||||| ||||| || ||||||||||| ||||| |||| |||
Sbjct: 676 atgcctggaatgacaggctatgatttgcttaaaaaaatcaaggaatcttcatctttgaga 735
Query: 313 gagattccagtggtggtcatgtcatcagagaat 345
| || ||||||||| | |||||||| ||||||
Sbjct: 736 aacataccagtggtgattatgtcatctgagaat 768
>gnl|LJGI|TC57251 similar to UniRef100_A7QJJ8 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 1047
Score = 65.9 bits (33), Expect = 2e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 253 atgcctgggatgacagggtatgaattgctcaagaaaatcaaggagtcttctgcttttaga 312
|||||||| |||||||| ||||| ||||| || ||||||||||| ||||| |||| |||
Sbjct: 327 atgcctggaatgacaggctatgatttgcttaaaaaaatcaaggaatcttcatctttgaga 386
Query: 313 gagattccagtggtggtcatgtcatcagagaat 345
| || ||||||||| | |||||||| ||||||
Sbjct: 387 aacataccagtggtgattatgtcatctgagaat 419