Miyakogusa Predicted Gene

Lj4g3v1561630.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1561630.1 tr|B9IFA6|B9IFA6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_666660 PE=4 SV=1,55.26,0.0001,
,CUFF.49418.1
         (206 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9...   377   e-104
gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosom...    80   6e-15
gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chr...    72   1e-12

>gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9C16.15; n=1;
           Arabidopsis thaliana|Rep: F9C16.15 - Arabidopsis
           thaliana (Mouse-ear cress), partial (3%)
          Length = 651

 Score =  377 bits (190), Expect = e-104
 Identities = 199/202 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttttcagtgaacccatggttcgtaattctgatttttcttgatacacatttagtttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atgttttcagtgaacccatggttcgtaattctgatttttcttgatacacatttagtttca 401

                                                                       
Query: 61  ataaaattgtcatgtttagtaacaaactttgaaacaagtctgtgtatgaggaacatgatt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 402 ataaaattgtcatgtttagtaacaaactttgaaacaggtctgtgtatgaggaacatgatt 461

                                                                       
Query: 121 ttgcttatacatgtcagatatggtttcatgcttgatgcacacaagttgtttgatgatatt 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 462 ttgcttatacatgtcagatatggtctcatgcttgatgcacacaagttgtttgatgatatt 521

                                 
Query: 181 cctgagagagatgtggtttcct 202
           ||| ||||||||||||||||||
Sbjct: 522 ccttagagagatgtggtttcct 543


>gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 741

 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                       
Query: 105 tatgaggaacatgattttgcttatacatgtcagatatggtttcatgcttgatgcacacaa 164
           ||||| ||||| | |||||||||| ||||| | || |||| ||||||| ||||| | |||
Sbjct: 568 tatgatgaacagggttttgcttatgcatgtgaaatgtggtctcatgctcgatgcgcgcaa 627

                                               
Query: 165 gttgtttgatgatattcctgagagagatgtggtttc 200
           | |||||| |||||| ||||||||||||||||||||
Sbjct: 628 gctgtttggtgatatgcctgagagagatgtggtttc 663


>gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 1047

 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                       
Query: 99  tctgtgtatgaggaacatgattttgcttatacatgtcagatatggtttcatgcttgatgc 158
           ||||| ||||| ||||| | |||||| ||| ||||| |||| |||| |||||||||||||
Sbjct: 642 tctgtatatgatgaacaaggttttgcatatgcatgtgagatgtggtctcatgcttgatgc 701

                                                       
Query: 159 acacaagttgtttgatgatattcctgagagagatgtggtttcct 202
           || |||| |||||| | |||||  ||||||||| | ||||||||
Sbjct: 702 acgcaagctgtttgctaatatttttgagagagacgcggtttcct 745