Miyakogusa Predicted Gene

Lj4g3v1560530.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1560530.1 tr|I8RPS3|I8RPS3_YERPE Ribosomal RNA small
subunit methyltransferase G OS=Yersinia pestis PY-102
GN=,42.75,2e-19,no description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; GidB,rRNA small subunit methyl,CUFF.49404.1
         (510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV422795 similar to UniRef100_Q9FGA0 Cluster: Similarit...   831   0.0  

>gnl|LJGI|AV422795 similar to UniRef100_Q9FGA0 Cluster: Similarity to glucose
           inhibited division protein B; n=1; Arabidopsis
           thaliana|Rep: Similarity to glucose inhibited division
           protein B - Arabidopsis thaliana (Mouse-ear cress),
           partial (29%)
          Length = 419

 Score =  831 bits (419), Expect = 0.0
 Identities = 419/419 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   tttgaacttgcagttttctccggggactttcatcaaacacctcacgtcccgaaaattcac 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tttgaacttgcagttttctccggggactttcatcaaacacctcacgtcccgaaaattcac 60

                                                                       
Query: 66  aacacactgtttgcacaaatcctccacaccctccctctcccacttcggaaccctaacctc 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aacacactgtttgcacaaatcctccacaccctccctctcccacttcggaaccctaacctc 120

                                                                       
Query: 126 tcgccagaaagaccagattcatctctacgtcgacgctcttcttcaatggaacaagcgtat 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgccagaaagaccagattcatctctacgtcgacgctcttcttcaatggaacaagcgtat 180

                                                                       
Query: 186 gaatctgacagcagttcgagaagtgaaccaagtcatggaaaggcacgtggaggattcgct 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatctgacagcagttcgagaagtgaaccaagtcatggaaaggcacgtggaggattcgct 240

                                                                       
Query: 246 tgcgattttacctccgttgagcgactgttaccgcgcgcactgcggtggttctggcgataa 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcgattttacctccgttgagcgactgttaccgcgcgcactgcggtggttctggcgataa 300

                                                                       
Query: 306 gctcagccttgttgatgtcggaaccggcgcgggcctccccggagtagttttggccatagc 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctcagccttgttgatgtcggaaccggcgcgggcctccccggagtagttttggccatagc 360

                                                                      
Query: 366 tcgtccagaatgggatgtgacgctgctcgagtctatgaacaagcgatgcgtcttcttgg 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgtccagaatgggatgtgacgctgctcgagtctatgaacaagcgatgcgtcttcttgg 419