Miyakogusa Predicted Gene

Lj4g3v1559460.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1559460.1 tr|B6TYH2|B6TYH2_MAIZE ROS1 protein OS=Zea mays
PE=2 SV=1,52.81,3e-18,DNA-glycosylase,DNA glycosylase,CUFF.49395.1
         (364 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74420 similar to UniRef100_A7PD67 Cluster: Chromosome...   700   0.0  

>gnl|LJGI|TC74420 similar to UniRef100_A7PD67 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 570

 Score =  700 bits (353), Expect = 0.0
 Identities = 353/353 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaagaggcggaaaaggaagcagcaggaggtggcggagctcaaggaacaacctccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  atggagaagaggcggaaaaggaagcagcaggaggtggcggagctcaaggaacaacctccg 114

                                                                       
Query: 61  cctcagccgaaatcggttcgtgtggaagagaatctgaagaacccattcccatctcacact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cctcagccgaaatcggttcgtgtggaagagaatctgaagaacccattcccatctcacact 174

                                                                       
Query: 121 cgacccactccacaagaatgccaaaccgtacgcgacactctcttatccctccacggcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cgacccactccacaagaatgccaaaccgtacgcgacactctcttatccctccacggcatc 234

                                                                       
Query: 181 ccgccggaactcgccaagtaccgccaactccaaccacccaactccggcacggaaccggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccgccggaactcgccaagtaccgccaactccaaccacccaactccggcacggaaccggag 294

                                                                       
Query: 241 gaaaccgttctcgacggtctcgtccgaaccgtgctctctcagaacaccacagaggccaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaaaccgttctcgacggtctcgtccgaaccgtgctctctcagaacaccacagaggccaat 354

                                                                
Query: 301 tcccaaaaggctttcgcttctctcaaatcctccttccccgattgggaacttgt 353
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcccaaaaggctttcgcttctctcaaatcctccttccccgattgggaacttgt 407