Miyakogusa Predicted Gene
- Lj4g3v1539340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1539340.1 tr|Q9FJW1|Q9FJW1_ARATH At5g67620 OS=Arabidopsis
thaliana GN=At5g67620 PE=2 SV=1,33.67,4e-19,seg,NULL; DUF4228,Protein
of unknown function DUF4228,CUFF.49382.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80177 similar to UniRef100_A7Q2I5 Cluster: Chromosome... 793 0.0
gnl|LJGI|DC596734 similar to UniRef100_A7PD56 Cluster: Chromosom... 577 e-164
gnl|LJGI|TC64221 weakly similar to UniRef100_Q53J17 Cluster: T10... 56 2e-07
>gnl|LJGI|TC80177 similar to UniRef100_A7Q2I5 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 620
Score = 793 bits (400), Expect = 0.0
Identities = 403/404 (99%)
Strand = Plus / Plus
Query: 152 gcacatcaaaggacagtgaaaactgtcctaataagaagagtgacagcaacaccaccaacc 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacatcaaaggacagtgaaaactgtcctaataagaagagtgacagcaacaccaccaacc 60
Query: 212 cagttcgccttacccgcatcaaacttctcaagccaacagatacccttgtgcttggccaag 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagttcgccttacccgcatcaaacttctcaagccaacagatacccttgtgcttggccaag 120
Query: 272 tatatagactcatctcagcgcaagaggttatgaagggtctgttggctaagaaacaagcca 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatatagactcatctcagcgcaagaggttatgaagggtctgttggctaagaaacaagcca 180
Query: 332 agatgaagagaaacgagtcagaatcagcaccaaagataaatcagaagaaggaaatgatgg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatgaagagaaacgagtcagaatcagcaccaaagataaatcagaagaaggaaatgatgg 240
Query: 392 acaaaccagcaaggaggtctgagcctgaggaaaaccaggaagccaaaaatgaaagacatg 451
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 acaaaccagcaaggaggtctgagcctgaggaaaaccaggaagcccaaaatgaaagacatg 300
Query: 452 ggtcaaggacaacagcatcaactactaatgctgctatcacaacagctaagtcaagaacat 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtcaaggacaacagcatcaactactaatgctgctatcacaacagctaagtcaagaacat 360
Query: 512 ggcaaccctcattaaaaagcatctctgaagcaacaagctgatct 555
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcaaccctcattaaaaagcatctctgaagcaacaagctgatct 404
>gnl|LJGI|DC596734 similar to UniRef100_A7PD56 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 540
Score = 577 bits (291), Expect = e-164
Identities = 294/295 (99%)
Strand = Plus / Plus
Query: 1 atgggaaattgccaagccattgatactgcaactctagtgatacagcaacccaatgggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 atgggaaattgccaagccattgatactgcaactctagtgatacagcaacccaatgggaaa 66
Query: 61 gaagagaagttgtattggcctgtgagtgctagtgaagtgatgaagacaaaccctggtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gaagagaagttgtattggcctgtgagtgctagtgaagtgatgaagacaaaccctggtcac 126
Query: 121 tatgttgctctcctcatctccaccacattgtgcacatcaaaggacagtgaaaactgtcct 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tatgttgctctcctcatttccaccacattgtgcacatcaaaggacagtgaaaactgtcct 186
Query: 181 aataagaagagtgacagcaacaccaccaacccagttcgccttacccgcatcaaacttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aataagaagagtgacagcaacaccaccaacccagttcgccttacccgcatcaaacttctc 246
Query: 241 aagccaacagatacccttgtgcttggccaagtatatagactcatctcagcgcaag 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aagccaacagatacccttgtgcttggccaagtatatagactcatctcagcgcaag 301
Score = 192 bits (97), Expect = 2e-48
Identities = 104/105 (99%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 294 agaggttatgaagggtctgttggctaagaaacaagccaagatgaagagaaacgagtcaga 353
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 437 agaggttatgaagggtctgttggctaagaaaca-gccaagatgaagagaaacgagtcaga 495
Query: 354 atcagcaccaaagataaatcagaagaaggaaatgatggacaaacc 398
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atcagcaccaaagataaatcagaagaaggaaatgatggacaaacc 540
>gnl|LJGI|TC64221 weakly similar to UniRef100_Q53J17 Cluster: T10O24.15, related;
n=1; Solanum lycopersicum|Rep: T10O24.15, related -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (74%)
Length = 872
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 209 acccagttcgccttacccgcatcaaacttctcaagccaacagatacccttgtgcttggcc 268
||||||||||| | || ||||| || ||||||||||| | ||| |||| | || ||||
Sbjct: 326 acccagttcgcttaactcgcataaagcttctcaagcccaatgattccctccttctaggcc 385
Query: 269 aagtatatagactcatctcagcgcaagaggttatgaaggg 308
| || |||||||||||| |||| |||||||| ||||||||
Sbjct: 386 atgtttatagactcatcacagctcaagaggtaatgaaggg 425