Miyakogusa Predicted Gene
- Lj4g3v1539290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1539290.1 Non Chatacterized Hit- tr|G7L7I0|G7L7I0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,67.84,0,DUF4220,Domain of unknown function DUF4220;
DUF594,Protein of unknown function DUF594; SUBFAMILY NOT,CUFF.49372.1
(1870 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75229 similar to UniRef100_A7P6I5 Cluster: Chromosome... 190 2e-47
gnl|LJGI|BP057895 similar to UniRef100_A7P6I5 Cluster: Chromosom... 137 3e-31
>gnl|LJGI|TC75229 similar to UniRef100_A7P6I5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 786
Score = 190 bits (96), Expect = 2e-47
Identities = 155/176 (88%), Gaps = 9/176 (5%)
Strand = Plus / Plus
Query: 1271 aaagcattcttctatggcatattgcaacaaatctatgttataactctgtctcatgcgaag 1330
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 367 aaagcattcttctatggcatattgcaacatatctatgttataaccctgtctcatgtgaag 426
Query: 1331 aggaaaca---------acaggtttaagttttagagaagcaagcaaattgttatcagagt 1381
|||||||| | ||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 427 aggaaacatatagcgaaaggggtttaagttttagagaaggaagaaaattgttattagagt 486
Query: 1382 acatgttgtatcttatagttatgagaccatccatgctacctaatgggattggtgag 1437
|||||||||||||||| ||||||||| |||||||||| ||||||| ||||||||||
Sbjct: 487 acatgttgtatcttattgttatgagaacatccatgctgcctaatgagattggtgag 542
Score = 178 bits (90), Expect = 8e-44
Identities = 173/200 (86%), Gaps = 3/200 (1%)
Strand = Plus / Plus
Query: 947 ttggccacaggtacatcaagggttttgaaaagaaaggagccaagtactgttgtcttgctc 1006
|||||| ||| ||||| ||||| ||||||| ||||| | |||||||| ||||||| |||
Sbjct: 138 ttggcctcagctacataaagggatttgaaaggaaagcatgcaagtactattgtctttctc 197
Query: 1007 cattgattaaaggtgtttggcagtcttatgagaaatacaagcacagcaaaagcaaacgcg 1066
|||||||||||||||||||||||||||||||||| || | ||||| || || |||
Sbjct: 198 cattgattaaaggtgtttggcagtcttatgagaagtatacgcacaatggcagtaaccgca 257
Query: 1067 agattgttacccctgatctgaagggaattatctttgagcactttataaataagataaaga 1126
|||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 258 agattgttactcctgatctggagggaattatctttcagcactttataaataagata---a 314
Query: 1127 aggtcatcacggaagaagag 1146
||||||||||||||||||||
Sbjct: 315 aggtcatcacggaagaagag 334
Score = 71.9 bits (36), Expect = 1e-11
Identities = 117/143 (81%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 1579 gataggagcaagtctgtgctatttgatgcttgcaggttggcaaaacatataagaaagcta 1638
||||||| ||||||||| |||||||| ||| || ||| |||||||||| || ||||
Sbjct: 566 gataggaccaagtctgtc--atttgatgtgtgcgggatggaaaaacatatacaaatgcta 623
Query: 1639 agggaagatgaaagctggaaagaaaaagcgatgtgggagttaatcactcaagtgtgggtt 1698
||||| |||||||| ||| | | ||||| |||||| || ||| ||||| || ||||||||
Sbjct: 624 agggaggatgaaagttgggaggtaaaagagatgtgagacttattcacttaaatgtgggtt 683
Query: 1699 gaaatgcttgcttatgctgctag 1721
||||| | |||||||||| ||||
Sbjct: 684 gaaattcatgcttatgctcctag 706
Score = 60.0 bits (30), Expect = 5e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1180 aagagattttgtgatcataggggtgacaaagttctgaaaagc 1221
||||||||||||| || |||||||||| ||||||||||||||
Sbjct: 330 aagagattttgtgttcgtaggggtgaccaagttctgaaaagc 371
>gnl|LJGI|BP057895 similar to UniRef100_A7P6I5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 479
Score = 137 bits (69), Expect = 3e-31
Identities = 116/133 (87%), Gaps = 9/133 (6%)
Strand = Plus / Minus
Query: 1271 aaagcattcttctatggcatattgcaacaaatctatgttataactctgtctcatgcgaag 1330
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 415 aaagcattcttctatggcatattgcaacatatctatgttataaccctgtctcatgtgaag 356
Query: 1331 aggaaac---------aacaggtttaagttttagagaagcaagcaaattgttatcagagt 1381
||||||| || ||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 355 aggaaacatatagcgaaaggggtttaagttttagagaaggaagaaaattgttattagagt 296
Query: 1382 acatgttgtatct 1394
|||||||||||||
Sbjct: 295 acatgttgtatct 283
Score = 71.9 bits (36), Expect = 1e-11
Identities = 117/143 (81%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 1579 gataggagcaagtctgtgctatttgatgcttgcaggttggcaaaacatataagaaagcta 1638
||||||| ||||||||| |||||||| ||| || ||| |||||||||| || ||||
Sbjct: 225 gataggaccaagtctgtc--atttgatgtgtgcgggatggaaaaacatatacaaatgcta 168
Query: 1639 agggaagatgaaagctggaaagaaaaagcgatgtgggagttaatcactcaagtgtgggtt 1698
||||| |||||||| ||| | | |||||||| ||| || ||| ||||| || ||||||||
Sbjct: 167 agggaggatgaaagttgggaggtaaaagcgacgtgagacttattcacttaaatgtgggtt 108
Query: 1699 gaaatgcttgcttatgctgctag 1721
||||| | |||||||||| ||||
Sbjct: 107 gaaattcatgcttatgctcctag 85
Score = 67.9 bits (34), Expect = 2e-10
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1180 aagagattttgtgatcataggggtgacaaagttctgaaaagc 1221
||||||||||||| || |||||||||||||||||||||||||
Sbjct: 452 aagagattttgtgttcgtaggggtgacaaagttctgaaaagc 411