Miyakogusa Predicted Gene
- Lj4g3v1536220.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1536220.3 tr|G7JNU5|G7JNU5_MEDTR Nucleobase ascorbate
transporter OS=Medicago truncatula GN=MTR_4g106750 PE=4
,94.63,0,Xan_ur_permease,Xanthine/uracil/vitamin C permease;
SODIUM-DEPENDENT VITAMIN C TRANSPORTER,NULL; XAN,CUFF.49437.3
(732 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76346 similar to UniRef100_Q27GI3 Cluster: Nucleobase... 914 0.0
gnl|LJGI|BI420067 similar to UniRef100_A7PD55 Cluster: Chromosom... 418 e-116
gnl|LJGI|TC62360 similar to UniRef100_Q27GI3 Cluster: Nucleobase... 398 e-110
gnl|LJGI|TC57752 similar to UniRef100_Q27GI3 Cluster: Nucleobase... 224 6e-58
gnl|LJGI|FS356039 similar to UniRef100_A7PD55 Cluster: Chromosom... 125 4e-28
gnl|LJGI|BP052176 similar to UniRef100_Q27GI3 Cluster: Nucleobas... 62 5e-09
>gnl|LJGI|TC76346 similar to UniRef100_Q27GI3 Cluster: Nucleobase-ascorbate
transporter 6; n=1; Arabidopsis thaliana|Rep:
Nucleobase-ascorbate transporter 6 - Arabidopsis
thaliana (Mouse-ear cress), partial (28%)
Length = 718
Score = 914 bits (461), Expect = 0.0
Identities = 461/461 (100%)
Strand = Plus / Plus
Query: 272 ggaaattcggagcagtttttgcctccattccacctcccatgattgctgcactgtattgct 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaattcggagcagtttttgcctccattccacctcccatgattgctgcactgtattgct 60
Query: 332 tgttttttggttatgttggagctggaggtctaagttttcttcaattctgcaacctcaata 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttttttggttatgttggagctggaggtctaagttttcttcaattctgcaacctcaata 120
Query: 392 gtttcagaacaaagttcgttttaggtttctctatcttcctgggcttgtctattccacagt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttcagaacaaagttcgttttaggtttctctatcttcctgggcttgtctattccacagt 180
Query: 452 acttcaacgagtacacagcaattaatggttatggtccagttcacacaggagcaagatggt 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttcaacgagtacacagcaattaatggttatggtccagttcacacaggagcaagatggt 240
Query: 512 tcaatgatatagtcaatgtaccattccaatcaaaagcatttgttgctggggttgtggcgt 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaatgatatagtcaatgtaccattccaatcaaaagcatttgttgctggggttgtggcgt 300
Query: 572 atttcttggataacacactgcataagaaggaatctgctattaggaaagacagaggaaaac 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttcttggataacacactgcataagaaggaatctgctattaggaaagacagaggaaaac 360
Query: 632 attggtgggacaagtaccggtccttcaagactgacacaagaagtgaggagttctattcac 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attggtgggacaagtaccggtccttcaagactgacacaagaagtgaggagttctattcac 420
Query: 692 tgcctttcaatctgaacaagtacttcccatctgtgtaattg 732
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcctttcaatctgaacaagtacttcccatctgtgtaattg 461
>gnl|LJGI|BI420067 similar to UniRef100_A7PD55 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 499
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Plus
Query: 1 atgatgatggcatcctttgttgctcttgtagagtccagtggagcttttactgctgtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgatgatggcatcctttgttgctcttgtagagtccagtggagcttttactgctgtttac 348
Query: 61 cgatttgcaagtgcaacaccattacccccatctattcttagtcggggtattggttggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cgatttgcaagtgcaacaccattacccccatctattcttagtcggggtattggttggcag 408
Query: 121 ggagttggcatactgttatcaggattgtttggaaccggcaatggatcctctgtatctgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggagttggcatactgttatcaggattgtttggaaccggcaatggatcctctgtatctgta 468
Query: 181 gagaatgctggtcttttggctttgactcgtg 211
|||||||||||||||||||||||||||||||
Sbjct: 469 gagaatgctggtcttttggctttgactcgtg 499
>gnl|LJGI|TC62360 similar to UniRef100_Q27GI3 Cluster: Nucleobase-ascorbate
transporter 6; n=1; Arabidopsis thaliana|Rep:
Nucleobase-ascorbate transporter 6 - Arabidopsis
thaliana (Mouse-ear cress), partial (33%)
Length = 836
Score = 398 bits (201), Expect = e-110
Identities = 444/525 (84%)
Strand = Plus / Plus
Query: 208 cgtgttggcagtcgaagagtggtgcaaatagctgctgggtttatgatcttcttttcaatt 267
|||||||| ||| ||||||| ||||||||| | ||||| |||||||| |||||||| |||
Sbjct: 6 cgtgttggtagtagaagagttgtgcaaatatcagctggatttatgattttcttttcgatt 65
Query: 268 ctagggaaattcggagcagtttttgcctccattccacctcccatgattgctgcactgtat 327
|| || ||||| ||||| ||||| |||||||| ||| ||||||| ||||||| |||||
Sbjct: 66 cttggaaaatttggagctgttttcgcctccatcccagctcccatttttgctgccctgtac 125
Query: 328 tgcttgttttttggttatgttggagctggaggtctaagttttcttcaattctgcaacctc 387
|||||||| || | |||||| || || ||||| | ||||||||||| || |||||||||
Sbjct: 126 tgcttgttcttcgcttatgtcggtgccggaggaattagttttcttcagttttgcaacctc 185
Query: 388 aatagtttcagaacaaagttcgttttaggtttctctatcttcctgggcttgtctattcca 447
|| || || |||||||||||| | ||||| |||||||||||||| ||||||||||| |||
Sbjct: 186 aacagctttagaacaaagttcatattaggcttctctatcttcctcggcttgtctatacca 245
Query: 448 cagtacttcaacgagtacacagcaattaatggttatggtccagttcacacaggagcaaga 507
|||||||||||||||||||| ||||| ||||| | |||||| || ||||| || || |||
Sbjct: 246 cagtacttcaacgagtacacggcaatcaatggctttggtccggtccacaccggcgccaga 305
Query: 508 tggttcaatgatatagtcaatgtaccattccaatcaaaagcatttgttgctggggttgtg 567
||||||||||||||| ||||||| || |||||||||||| ||||||||| || ||||||
Sbjct: 306 tggttcaatgatataatcaatgttccgttccaatcaaaaccatttgttgggggtgttgtg 365
Query: 568 gcgtatttcttggataacacactgcataagaaggaatctgctattaggaaagacagagga 627
|| |||||||| || ||||| | | ||| || |||||||| ||||| ||||||||
Sbjct: 366 gcatatttcttagacaacactttatacaagcgagattctgctataaggaaggacagaggg 425
Query: 628 aaacattggtgggacaagtaccggtccttcaagactgacacaagaagtgaggagttctat 687
||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||||
Sbjct: 426 aaacattggtgggacaagtacaagtccttcaaaggggacacgagaagtgaagagttctat 485
Query: 688 tcactgcctttcaatctgaacaagtacttcccatctgtgtaattg 732
||||| || |||||||| |||||||||||||||||||| ||||||
Sbjct: 486 tcactaccattcaatctaaacaagtacttcccatctgtttaattg 530
>gnl|LJGI|TC57752 similar to UniRef100_Q27GI3 Cluster: Nucleobase-ascorbate transporter
6; n=1; Arabidopsis thaliana|Rep: Nucleobase-ascorbate
transporter 6 - Arabidopsis thaliana (Mouse-ear cress),
partial (68%)
Length = 1200
Score = 224 bits (113), Expect = 6e-58
Identities = 179/201 (89%)
Strand = Plus / Plus
Query: 1 atgatgatggcatcctttgttgctcttgtagagtccagtggagcttttactgctgtttac 60
|||||||||||| | |||||||||||||||||||||| ||||||||| | ||| || ||
Sbjct: 984 atgatgatggcagcttttgttgctcttgtagagtccactggagctttcattgcagtatat 1043
Query: 61 cgatttgcaagtgcaacaccattacccccatctattcttagtcggggtattggttggcag 120
| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1044 aggtatgcaagtgcaacaccattaccaccatctattcttagtcgtggtattggttggcag 1103
Query: 121 ggagttggcatactgttatcaggattgtttggaaccggcaatggatcctctgtatctgta 180
||||||||||| ||||||||||||||||||||||| | | |||||| |||||||| |||
Sbjct: 1104 ggagttggcattctgttatcaggattgtttggaacagttactggatcttctgtatccgta 1163
Query: 181 gagaatgctggtcttttggct 201
|| ||||| ||||||||||||
Sbjct: 1164 gaaaatgcaggtcttttggct 1184
>gnl|LJGI|FS356039 similar to UniRef100_A7PD55 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 699
Score = 125 bits (63), Expect = 4e-28
Identities = 303/383 (79%)
Strand = Plus / Minus
Query: 154 accggcaatggatcctctgtatctgtagagaatgctggtcttttggctttgactcgtgtt 213
||||| |||||||| || || ||||| |||||||| || || || |||||||| || ||
Sbjct: 696 accgggaatggatcatcagtttctgttgagaatgcaggactcttagctttgacacgcgtg 637
Query: 214 ggcagtcgaagagtggtgcaaatagctgctgggtttatgatcttcttttcaattctaggg 273
|| || ||||| || || |||||| | ||||| || ||||| || || |||||||| ||
Sbjct: 636 ggtagccgaagggttgttcaaatatcagctggattcatgatttttttctcaattcttgga 577
Query: 274 aaattcggagcagtttttgcctccattccacctcccatgattgctgcactgtattgcttg 333
||||| ||||| |||||||| || |||||| |||| || ||||| || |||||||| |
Sbjct: 576 aaatttggagctgtttttgcttcaattccagctcctataattgcagctttgtattgcctt 517
Query: 334 ttttttggttatgttggagctggaggtctaagttttcttcaattctgcaacctcaatagt 393
|| |||| ||||| || ||| |||||| ||||| |||||||| ||||| | |||||
Sbjct: 516 ttctttgcctatgtgggctctgcaggtctcagtttccttcaattttgcaatttgaatagc 457
Query: 394 ttcagaacaaagttcgttttaggtttctctatcttcctgggcttgtctattccacagtac 453
|| ||||| || ||| | ||||| |||||| | || ||||||| || || ||||| |||
Sbjct: 456 tttagaactaaattcatcttaggcttctctgtttttatgggcttctcaataccacaatac 397
Query: 454 ttcaacgagtacacagcaattaatggttatggtccagttcacacaggagcaagatggttc 513
||||||||||| ||||| | || || |||||||| || ||||| | ||||||||||||
Sbjct: 396 ttcaacgagtatacagcgttcaaaggctatggtcctgtgcacactcgtgcaagatggttc 337
Query: 514 aatgatatagtcaatgtaccatt 536
|||||||| ||||||| |||||
Sbjct: 336 aatgatatgatcaatgtcccatt 314
>gnl|LJGI|BP052176 similar to UniRef100_Q27GI3 Cluster: Nucleobase-ascorbate
transporter 6; n=1; Arabidopsis thaliana|Rep:
Nucleobase-ascorbate transporter 6 - Arabidopsis
thaliana (Mouse-ear cress), partial (23%)
Length = 529
Score = 61.9 bits (31), Expect = 5e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 657 caagactgacacaagaagtgaggagttctattcactgcctttcaatctgaacaagtactt 716
|||||| || ||||||||||||||||| || || || || |||||||| ||||||| |||
Sbjct: 235 caagacagatacaagaagtgaggagttttactccctacccttcaatcttaacaagttctt 176
Query: 717 cccatctgtgt 727
||| |||||||
Sbjct: 175 cccttctgtgt 165