Miyakogusa Predicted Gene
- Lj4g3v1535110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1535110.1 tr|G7JNT8|G7JNT8_MEDTR Rna-dependent RNA
polymerase OS=Medicago truncatula GN=MTR_4g106660 PE=4
SV=1,78.55,0,RdRP,RNA-dependent RNA polymerase, eukaryotic-type;
RNA-DEPENDENT RNA POLYMERASE,RNA-dependent RNA p,CUFF.49363.1
(3369 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60008 similar to UniRef100_A7PD40 Cluster: Chromosome... 1382 0.0
gnl|LJGI|TC65509 weakly similar to UniRef100_A7PD40 Cluster: Chr... 1308 0.0
>gnl|LJGI|TC60008 similar to UniRef100_A7PD40 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 796
Score = 1382 bits (697), Expect = 0.0
Identities = 697/697 (100%)
Strand = Plus / Plus
Query: 2673 agttcatgctgaccgtgaaccagataaagccaggagctcaaaatgtctggagctggcaca 2732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttcatgctgaccgtgaaccagataaagccaggagctcaaaatgtctggagctggcaca 60
Query: 2733 gcttcattccatggctgttgactttgcaaagaccggtgcgcctgctgcgatgcctagagt 2792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttcattccatggctgttgactttgcaaagaccggtgcgcctgctgcgatgcctagagt 120
Query: 2793 tttgaaaccaagagtttttccagatttcatggagaggtttgaaaagcctatgtatatctc 2852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgaaaccaagagtttttccagatttcatggagaggtttgaaaagcctatgtatatctc 180
Query: 2853 caacggggtgctgggaaaactttaccgtgccttagttgagtcaaaattgcaggcaagttc 2912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caacggggtgctgggaaaactttaccgtgccttagttgagtcaaaattgcaggcaagttc 240
Query: 2913 taacgttgtctggtcagagaagcttgctgaagacgcatatgatcttaatcttgaagctaa 2972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taacgttgtctggtcagagaagcttgctgaagacgcatatgatcttaatcttgaagctaa 300
Query: 2973 tggttttgaggccttccttgaaactgcatcaagtcacaaagaaatgtatgcagagaagat 3032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggttttgaggccttccttgaaactgcatcaagtcacaaagaaatgtatgcagagaagat 360
Query: 3033 gaccgctttaatgaagttctatggtgcagagactgaggatgaactgctaaccggtaacct 3092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaccgctttaatgaagttctatggtgcagagactgaggatgaactgctaaccggtaacct 420
Query: 3093 gcaaaaccgagcttcgtatttgcagcgtgataaccggaggtatacagatatgaaggatcg 3152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcaaaaccgagcttcgtatttgcagcgtgataaccggaggtatacagatatgaaggatcg 480
Query: 3153 gattctgatctcggtgaaggatcttcagcgtgaagccaaagaatggtttgaagctgattg 3212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gattctgatctcggtgaaggatcttcagcgtgaagccaaagaatggtttgaagctgattg 540
Query: 3213 tcaacagcatgaatatcaagctatggcgtctgcatggtatcatgtgacctatcacccaaa 3272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcaacagcatgaatatcaagctatggcgtctgcatggtatcatgtgacctatcacccaaa 600
Query: 3273 atattaccatgaaagctccagtttcttgagctttccgtggatagttggtgacattttgtt 3332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atattaccatgaaagctccagtttcttgagctttccgtggatagttggtgacattttgtt 660
Query: 3333 gcacattaagtctgtaaacagtaaagtactcagttga 3369
|||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcacattaagtctgtaaacagtaaagtactcagttga 697
>gnl|LJGI|TC65509 weakly similar to UniRef100_A7PD40 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 737
Score = 1308 bits (660), Expect = 0.0
Identities = 660/660 (100%)
Strand = Plus / Plus
Query: 1 atgggggttccgactggtaaacccaccgtccgcatcttcaacattccccaatccgccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgggggttccgactggtaaacccaccgtccgcatcttcaacattccccaatccgccacc 137
Query: 61 gccaaggacctcctcgccttcctcaagtccacatttggtccctcctccatctacgccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gccaaggacctcctcgccttcctcaagtccacatttggtccctcctccatctacgccctc 197
Query: 121 gaaatcttttccgattactccaactggaagtctcgcggctccggccgcgtccagttcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gaaatcttttccgattactccaactggaagtctcgcggctccggccgcgtccagttcgag 257
Query: 181 gacctcgccaccaagtcccgcgccctctctctcgccgaatcccagaagctcatcttcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gacctcgccaccaagtcccgcgccctctctctcgccgaatcccagaagctcatcttcaag 317
Query: 241 tcccacttcctccgcctctccgaaaactccgatgatatcatcccccggcctccgctcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcccacttcctccgcctctccgaaaactccgatgatatcatcccccggcctccgctcccc 377
Query: 301 caacaccgcctcaacaacaccatcctcaatgcaggcttcaccgtcggacctgacgatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caacaccgcctcaacaacaccatcctcaatgcaggcttcaccgtcggacctgacgatttt 437
Query: 361 gttattctcgacacctgggatggtgttcaggggtggatcatgccagaacggaggaaactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gttattctcgacacctgggatggtgttcaggggtggatcatgccagaacggaggaaactt 497
Query: 421 gaattctgggtctggttccaaggggagtgttacaagcttgaaatcccttttgaagatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaattctgggtctggttccaaggggagtgttacaagcttgaaatcccttttgaagatatt 557
Query: 481 ttggagactgttggctatgcttctggtgatgatggtaaacccccagatgccctcatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttggagactgttggctatgcttctggtgatgatggtaaacccccagatgccctcatcttg 617
Query: 541 aagctgaaatatgggccaaggatatatcagaggaaatcagggccagatatagcctccaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aagctgaaatatgggccaaggatatatcagaggaaatcagggccagatatagcctccaag 677
Query: 601 tttaaggctgataggtaccatttctgtaaggatgatatcgagtttctttgggtgcgaaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tttaaggctgataggtaccatttctgtaaggatgatatcgagtttctttgggtgcgaaca 737