Miyakogusa Predicted Gene

Lj4g3v1535080.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1535080.1 Non Chatacterized Hit- tr|K4C8K9|K4C8K9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,48.12,3e-19,NHL
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAMED,NULL,CUFF.49357.1
         (436 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58770 similar to UniRef100_Q67UK6 Cluster: NHL repeat...   864   0.0  

>gnl|LJGI|TC58770 similar to UniRef100_Q67UK6 Cluster: NHL repeat-containing
           protein-like; n=1; Oryza sativa Japonica Group|Rep: NHL
           repeat-containing protein-like - Oryza sativa subsp.
           japonica (Rice), partial (21%)
          Length = 992

 Score =  864 bits (436), Expect = 0.0
 Identities = 436/436 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccatcgagctcgaatctgaatccaccacacccaccggccaccagagatccaacgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgtccatcgagctcgaatctgaatccaccacacccaccggccaccagagatccaacgcc 162

                                                                       
Query: 61  ttctgcttctgcttcggcccacgccgccgttcctcgtggtggcagcgcgtccgcacgtcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ttctgcttctgcttcggcccacgccgccgttcctcgtggtggcagcgcgtccgcacgtcc 222

                                                                       
Query: 121 cactccaccgtctccggcgacaggtggtggtcgcgcggcatcagggcgctgaagaaggtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cactccaccgtctccggcgacaggtggtggtcgcgcggcatcagggcgctgaagaaggtc 282

                                                                       
Query: 181 cgagagtggtcggagatcttagcgggccccagatggaagacattcatccgccggctcagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cgagagtggtcggagatcttagcgggccccagatggaagacattcatccgccggctcagc 342

                                                                       
Query: 241 caccaccgctcccataaacgcatgaccaagtatcagtacgaccccttcagctacgccttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 caccaccgctcccataaacgcatgaccaagtatcagtacgaccccttcagctacgccttg 402

                                                                       
Query: 301 aacttcgacgaggggcagaacggggatttccctgatgacgggtttcgtaacttctccacg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aacttcgacgaggggcagaacggggatttccctgatgacgggtttcgtaacttctccacg 462

                                                                       
Query: 361 cgctacgccgtcgccgccgttaagccggtttcttcgccggagaaggggtctgacgtcgcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cgctacgccgtcgccgccgttaagccggtttcttcgccggagaaggggtctgacgtcgcc 522

                           
Query: 421 gttttgtgtgagtgag 436
           ||||||||||||||||
Sbjct: 523 gttttgtgtgagtgag 538