Miyakogusa Predicted Gene
- Lj4g3v1535060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1535060.1 tr|Q1XG54|Q1XG54_CRYJA Similarity to ribonuclease
III OS=Cryptomeria japonica PE=2 SV=1,38.21,1e-17,RNase III
domain-like,Ribonuclease III domain; Ribonuclease III
family,Ribonuclease III domain; no d,CUFF.49408.1
(543 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59807 1061 0.0
gnl|LJGI|TC74975 UniRef100_Q9MBE5 Cluster: Cytochrome P450; n=1;... 888 0.0
gnl|LJGI|GO041366 weakly similar to UniRef100_A5WCD8 Cluster: RN... 543 e-154
>gnl|LJGI|TC59807
Length = 864
Score = 1061 bits (535), Expect = 0.0
Identities = 541/543 (99%)
Strand = Plus / Plus
Query: 1 atgcgatcctctgccactcttcccttcaccctcttcactctcatcctcatccccatcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atgcgatcctctgccactcttcccttcaccctcttcactctcatcctcatccccatcctc 165
Query: 61 ccccatgcccaggggcattcactactgtcgccgtttccatcagctctcgaaaccctccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ccccatgcccaggggcattcactactgtcgccgtttccatcagctctcgaaaccctccag 225
Query: 121 aaacaactaggctacaatttcaagaccattagtctccttcgtcgcgcgatgacccacgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 aaacaactaggctacaatttcaagaccattagtctccttcgtcgcgcgatgacccacgct 285
Query: 181 tcattctccgaggagaacaacaaagcattgagcattttgggtgctgctgtcattgaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tcattctccgaggagaacaacaaagcattgagcattttgggtgctgctgtcattgaaaca 345
Query: 241 tctgcttcttttcacttgatttccaaggacattgatatttctgccaaagagcttaaccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 346 tctgcttcttttcacttgatttccaaggacattgatatttctgccaaagagtttaaccgt 405
Query: 301 agattgtcccaggtctccaatgtggaatcttcctgtgctgttgatggagtgcatttgggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 406 agattgtcccaggtctccaatgtggaatcttcctgtgctgttgatggagtgtatttgggc 465
Query: 361 ttgcacaaggtggttcgagtctcgcctaagaccaattcctctgcccctgctgtggtttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttgcacaaggtggttcgagtctcgcctaagaccaattcctctgcccctgctgtggtttgt 525
Query: 421 ggcgcgttccgggcaatttttggtgctattgctattgatactgggaaatcggatgatgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggcgcgttccgggcaatttttggtgctattgctattgatactgggaaatcggatgatgcc 585
Query: 481 ggtaatgttttctggaccattcatggtgttggtgatgttggggttgctgcagcattgtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ggtaatgttttctggaccattcatggtgttggtgatgttggggttgctgcagcattgtga 645
Query: 541 tat 543
|||
Sbjct: 646 tat 648
>gnl|LJGI|TC74975 UniRef100_Q9MBE5 Cluster: Cytochrome P450; n=1; Lotus
japonicus|Rep: Cytochrome P450 - Lotus japonicus,
partial (6%)
Length = 755
Score = 888 bits (448), Expect = 0.0
Identities = 454/456 (99%)
Strand = Plus / Plus
Query: 88 tcgccgtttccatcagctctcgaaaccctccagaaacaactaggctacaatttcaagacc 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgccgtttccatcagctctcgaaaccctccagaaacaactaggctacaatttcaagacc 240
Query: 148 attagtctccttcgtcgcgcgatgacccacgcttcattctccgaggagaacaacaaagca 207
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 attagtctccttcgtcgcgcgatgacccacgcttcattctccggggagaacaacaaagca 300
Query: 208 ttgagcattttgggtgctgctgtcattgaaacatctgcttcttttcacttgatttccaag 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgagcattttgggtgctgctgtcattgaaacatctgcttcttttcacttgatttccaag 360
Query: 268 gacattgatatttctgccaaagagcttaaccgtagattgtcccaggtctccaatgtggaa 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacattgatatttctgccaaagagcttaaccgtagattgtcccaggtctccaatgtggaa 420
Query: 328 tcttcctgtgctgttgatggagtgcatttgggcttgcacaaggtggttcgagtctcgcct 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcttcctgtgctgttgatggagtgcatttgggcttgcacaaggtggttcgagtctcgcct 480
Query: 388 aagaccaattcctctgcccctgctgtggtttgtggcgcgttccgggcaatttttggtgct 447
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 aagaccaattcctctgcccctgctgtggtttgtgacgcgttccgggcaatttttggtgct 540
Query: 448 attgctattgatactgggaaatcggatgatgccggtaatgttttctggaccattcatggt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attgctattgatactgggaaatcggatgatgccggtaatgttttctggaccattcatggt 600
Query: 508 gttggtgatgttggggttgctgcagcattgtgatat 543
||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttggtgatgttggggttgctgcagcattgtgatat 636
>gnl|LJGI|GO041366 weakly similar to UniRef100_A5WCD8 Cluster: RNAse III; n=1;
Psychrobacter sp. PRwf-1|Rep: RNAse III - Psychrobacter
sp. (strain PRwf-1), partial (9%)
Length = 767
Score = 543 bits (274), Expect = e-154
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 53 ccatcctcccccatgcccaggggcattcactactgtcgccgtttccatcagctctcgaaa 112
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 767 ccatcctcccccatgcccaggggcattcactactgtcgccgtttccatcagcgctcgaaa 708
Query: 113 ccctccagaaacaactaggctacaatttcaagaccattagtctccttcgtcgcgcgatga 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ccctccagaaacaactaggctacaatttcaagaccattagtctccttcgtcgcgcgatga 648
Query: 173 cccacgcttcattctccgaggagaacaacaaagcattgagcattttgggtgctgctgtca 232
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 647 cccacgcttcattctccgaggagaacaacaaagcattgagcattttgggtgttgctgtca 588
Query: 233 ttgaaacatctgcttcttttcacttgatttccaaggacattgatatttctgccaaagagc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttgaaacatctgcttcttttcacttgatttccaaggacattgatatttctgccaaagagc 528
Query: 293 ttaaccgtagattgtcccaggtctccaatgtggaatcttcct 334
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttaaccgtagattgtcccaggtctccaatgtggaatcttcct 486
Score = 285 bits (144), Expect = 1e-76
Identities = 147/148 (99%)
Strand = Plus / Minus
Query: 396 ttcctctgcccctgctgtggtttgtggcgcgttccgggcaatttttggtgctattgctat 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttcctctgcccctgctgtggtttgtggcgcgttccgggcaatttttggtgctattgctat 431
Query: 456 tgatactgggaaatcggatgatgccggtaatgttttctggaccattcatggtgttggtga 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgatactgggaaatcggatgatgccggtaatgttttctggaccattcatggtgttggtga 371
Query: 516 tgttggggttgctgcagcattgtgatat 543
||||||||||||| ||||||||||||||
Sbjct: 370 tgttggggttgctacagcattgtgatat 343