Miyakogusa Predicted Gene

Lj4g3v1534900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1534900.1 Non Chatacterized Hit- tr|I1MTI6|I1MTI6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7923
PE=,69.78,0,Modified RING finger domain,U box domain;
Armadillo/beta-catenin-like repeats,Armadillo;
ANKYRIN-REP,CUFF.49341.1
         (2097 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW609027 weakly similar to UniRef100_A7Q2D4 Cluster: Ch...   767   0.0  

>gnl|LJGI|BW609027 weakly similar to UniRef100_A7Q2D4 Cluster: Chromosome chr1
           scaffold_46, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 450

 Score =  767 bits (387), Expect = 0.0
 Identities = 393/395 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactaacaacatcacaacaactcaaagggaccgccgtattctctcattcccggcggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  atgactaacaacatcacaacaactcaaagggaccgccgtattctctcattcccggcggtt 115

                                                                       
Query: 61  caaccctgcgaaggcatatctccggcaaccctcctcacttctctattatcactctcacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 caaccctgcgaaggcatatctccggcaaccctcctcacttctctattatcactctcacaa 175

                                                                       
Query: 121 accatatgcaatttccaaccccaatctttcaccacccaacgaagaaacgccagagaaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 accatatgcaatttccaaccccaatctttcaccacccaacgaagaaacgccagagaaacc 235

                                                                       
Query: 181 acacgccaaattggcatcattctcatcttcctccaagaacgtgagtttctcatccctgat 240
           |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 236 acacgccaaattggcatcattctcatcttccttcgagaacgtgagtttctcatccctgat 295

                                                                       
Query: 241 tctttagtcctatccttctcagaactccacttcactctacaaaagattcacttcttgcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tctttagtcctatccttctcagaactccacttcactctacaaaagattcacttcttgcta 355

                                                                       
Query: 301 caagattgttccctacaaggttctcgtctcttgattctgaccaagtctcacaccgtcgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 caagattgttccctacaaggttctcgtctcttgattctgaccaagtctcacaccgtcgcc 415

                                              
Query: 361 tctcattttcgatcactcattcgcactgtggccac 395
           |||||||||||||||||||||||||||||||||||
Sbjct: 416 tctcattttcgatcactcattcgcactgtggccac 450