Miyakogusa Predicted Gene
- Lj4g3v1512520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1512520.1 tr|Q8LQ55|Q8LQ55_ORYSJ Integral membrane
protein-like OS=Oryza sativa subsp. japonica
GN=P0039G05.12,38.6,2e-19,seg,NULL; DUF588,Uncharacterised protein
family UPF0497, trans-membrane plant,CUFF.49327.1
(558 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62108 similar to UniRef100_A7PD16 Cluster: Chromosome... 1106 0.0
gnl|LJGI|AU251526 weakly similar to UniRef100_P09125 Cluster: Me... 56 2e-07
gnl|LJGI|TC80643 similar to UniRef100_O24088 Cluster: MtN24 prot... 52 4e-06
gnl|LJGI|TC68756 weakly similar to UniRef100_A7PD16 Cluster: Chr... 52 4e-06
gnl|LJGI|TC68643 similar to UniRef100_O24088 Cluster: MtN24 prot... 52 4e-06
>gnl|LJGI|TC62108 similar to UniRef100_A7PD16 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1280
Score = 1106 bits (558), Expect = 0.0
Identities = 558/558 (100%)
Strand = Plus / Plus
Query: 1 atgaatcagggcccgaagacgatcggcgctagaagccgtgaagacggcggaggtagggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgaatcagggcccgaagacgatcggcgctagaagccgtgaagacggcggaggtagggtg 371
Query: 61 agacctgtggcggcggtggcggtgtcgaaaagggaagtgatggcgaggaaggttgcgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agacctgtggcggcggtggcggtgtcgaaaagggaagtgatggcgaggaaggttgcgtta 431
Query: 121 gggttccggttgagcgaggtggtgctgtgtctgatttctttctcggtgatggctgctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gggttccggttgagcgaggtggtgctgtgtctgatttctttctcggtgatggctgctgat 491
Query: 181 aagactcaaggttggagtggtgactcttttgatcgctacaaggaatacaggtactgtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aagactcaaggttggagtggtgactcttttgatcgctacaaggaatacaggtactgtttg 551
Query: 241 tctgtgaatgttattgcatttgcatatgcagcttttcaagcatgtgatctgggctatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tctgtgaatgttattgcatttgcatatgcagcttttcaagcatgtgatctgggctatcaa 611
Query: 301 ctatttgctgggagacaactaatcaatcaccacctgcactttcacttcgatttcttcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ctatttgctgggagacaactaatcaatcaccacctgcactttcacttcgatttcttcatg 671
Query: 361 gatcaggttctagcatatcttttgatatcagcagcatcatctgcagccagcagggttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gatcaggttctagcatatcttttgatatcagcagcatcatctgcagccagcagggttgat 731
Query: 421 gactggcaatcaaattggggaaaagatgagttcactgagatggctagtgcttcaattgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gactggcaatcaaattggggaaaagatgagttcactgagatggctagtgcttcaattgga 791
Query: 481 ttggccttccttgctttcattgcctttgctgttagctcattaatctctggctataacctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ttggccttccttgctttcattgcctttgctgttagctcattaatctctggctataacctc 851
Query: 541 tgcactatctacccctag 558
||||||||||||||||||
Sbjct: 852 tgcactatctacccctag 869
>gnl|LJGI|AU251526 weakly similar to UniRef100_P09125 Cluster: Merozoite surface
protein CMZ-8; n=1; Eimeria acervulina|Rep: Merozoite
surface protein CMZ-8 - Eimeria acervulina, partial
(12%)
Length = 371
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 105 gaggaaggttgcgttagggttccggttgagcgaggtggtgctgtgtctgatt 156
||||||||| ||| ||||||| ||| |||||||||||| | |||||||||||
Sbjct: 320 gaggaaggtggcgctagggtttcggctgagcgaggtggcggtgtgtctgatt 371
>gnl|LJGI|TC80643 similar to UniRef100_O24088 Cluster: MtN24 protein; n=1; Medicago
truncatula|Rep: MtN24 protein - Medicago truncatula
(Barrel medic), partial (31%)
Length = 772
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 146 tgtgtctgatttctttctcggtgatggctgctgataag 183
||||||||||||||||| | ||||||||||| ||||||
Sbjct: 285 tgtgtctgatttctttcacagtgatggctgcagataag 322
>gnl|LJGI|TC68756 weakly similar to UniRef100_A7PD16 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 678
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 146 tgtgtctgatttctttctcggtgatggctgctgataag 183
||||||||||||||||| | ||||||||||| ||||||
Sbjct: 326 tgtgtctgatttctttcacagtgatggctgcagataag 363
>gnl|LJGI|TC68643 similar to UniRef100_O24088 Cluster: MtN24 protein; n=1; Medicago
truncatula|Rep: MtN24 protein - Medicago truncatula
(Barrel medic), partial (31%)
Length = 1045
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 146 tgtgtctgatttctttctcggtgatggctgctgataag 183
||||||||||||||||| | ||||||||||| ||||||
Sbjct: 329 tgtgtctgatttctttcacagtgatggctgcagataag 366