Miyakogusa Predicted Gene
- Lj4g3v1479300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1479300.1 tr|B9GZJ6|B9GZJ6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_554061 PE=4
SV=1,44.12,0.000000002,FAMILY NOT NAMED,NULL;
PARP_CATALYTIC,Poly(ADP-ribose) polymerase, catalytic domain; RST,RST
domain ,CUFF.49312.1
(1047 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74800 weakly similar to UniRef100_A7PD06 Cluster: Chr... 2076 0.0
>gnl|LJGI|TC74800 weakly similar to UniRef100_A7PD06 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 1701
Score = 2076 bits (1047), Expect = 0.0
Identities = 1047/1047 (100%)
Strand = Plus / Plus
Query: 1 atggatccaaggggtaacacttcgtcgccaccgttgcctcgtgatttctccggcgacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggatccaaggggtaacacttcgtcgccaccgttgcctcgtgatttctccggcgacgac 420
Query: 61 accgacgattcgatggcttccgattgcgagagcggagtttccggcggcgaggtgatcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accgacgattcgatggcttccgattgcgagagcggagtttccggcggcgaggtgatcgtc 480
Query: 121 cgggcggatgtgcgcagcttggagtcggttggaagaagattcattgacggacttggtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgggcggatgtgcgcagcttggagtcggttggaagaagattcattgacggacttggtcct 540
Query: 181 ctcgcttcgagaatccaggttgtatcgattcggaggaataaattccctaccgtgatttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcgcttcgagaatccaggttgtatcgattcggaggaataaattccctaccgtgatttcg 600
Query: 241 caagcgcgtgttgactcgtttcagatcttcgcgcgtgccaccgcccagctccgtcacggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caagcgcgtgttgactcgtttcagatcttcgcgcgtgccaccgcccagctccgtcacggg 660
Query: 301 aatgccaacgtcaagcacgcttggtatagcgtttctggcatggaggagattctcgagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatgccaacgtcaagcacgcttggtatagcgtttctggcatggaggagattctcgagatt 720
Query: 361 cttcaacacggtttcgggcatgaccatcatcgtggcctgcgtctctctccagaggattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttcaacacggtttcgggcatgaccatcatcgtggcctgcgtctctctccagaggattct 780
Query: 421 cctcacctcagtgtgagaaggtctgttgctgacaaagatggtttgaggcacttggtgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cctcacctcagtgtgagaaggtctgttgctgacaaagatggtttgaggcacttggtgctg 840
Query: 481 tgccgtgttatcctgggaaggatggaggtggtgtctcccggttcggatcaatgccggtcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgccgtgttatcctgggaaggatggaggtggtgtctcccggttcggatcaatgccggtcg 900
Query: 541 atttccgacgagtatgattccggggtggatgatgtttcgtccccgaaggagtacttcatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atttccgacgagtatgattccggggtggatgatgtttcgtccccgaaggagtacttcatt 960
Query: 601 aggagtaacaggatgaacacacatgtcttgcctgaatatgttttgagtttcaggattccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aggagtaacaggatgaacacacatgtcttgcctgaatatgttttgagtttcaggattccc 1020
Query: 661 cccacaggtcgtgctgtgaatgttgctgctgctcgcgagccttcgaggccgaaatcccct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 cccacaggtcgtgctgtgaatgttgctgctgctcgcgagccttcgaggccgaaatcccct 1080
Query: 721 tgggttccattcccagcactgatttcagcgctgtccaagattttgcctcagcatgatatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tgggttccattcccagcactgatttcagcgctgtccaagattttgcctcagcatgatatg 1140
Query: 781 gccatcgttttgaagcttcaaaaagattatagagaaatgaagatttcaagacagcaaatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gccatcgttttgaagcttcaaaaagattatagagaaatgaagatttcaagacagcaaatg 1200
Query: 841 atacaaaagttgagagtgattgctggggacaagttgttgtttcaggtcattaaatctttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 atacaaaagttgagagtgattgctggggacaagttgttgtttcaggtcattaaatctttc 1260
Query: 901 agagaaaagttacagaaaccaccccctagctgtaacaaagtgaaagaatggcaacaggaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 agagaaaagttacagaaaccaccccctagctgtaacaaagtgaaagaatggcaacaggaa 1320
Query: 961 agccagcaaccaaccgctagctgtaacaaagagagagaatggcaaccggaaagccagcaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 agccagcaaccaaccgctagctgtaacaaagagagagaatggcaaccggaaagccagcaa 1380
Query: 1021 agtggaataaataattctctatattga 1047
|||||||||||||||||||||||||||
Sbjct: 1381 agtggaataaataattctctatattga 1407