Miyakogusa Predicted Gene

Lj4g3v1479290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1479290.1 Non Chatacterized Hit- tr|C5WRZ3|C5WRZ3_SORBI
Putative uncharacterized protein Sb01g000700
OS=Sorghu,29.95,3e-19,PARP_CATALYTIC,Poly(ADP-ribose) polymerase,
catalytic domain; ADP-ribosylation,NULL; RST,RST domain ,CUFF.49311.1
         (558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74800 weakly similar to UniRef100_A7PD06 Cluster: Chr...   476   e-134

>gnl|LJGI|TC74800 weakly similar to UniRef100_A7PD06 Cluster: Chromosome chr17
            scaffold_12, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (42%)
          Length = 1701

 Score =  476 bits (240), Expect = e-134
 Identities = 240/240 (100%)
 Strand = Plus / Plus

                                                                        
Query: 16   agtgtgagaaggtctgttgctgacaaagatggtttgaggcacttggtgctgtgccgtgtt 75
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790  agtgtgagaaggtctgttgctgacaaagatggtttgaggcacttggtgctgtgccgtgtt 849

                                                                        
Query: 76   atcctgggaaggatggaggtggtgtctcccggttcggatcaatgccggtcgatttccgac 135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850  atcctgggaaggatggaggtggtgtctcccggttcggatcaatgccggtcgatttccgac 909

                                                                        
Query: 136  gagtatgattccggggtggatgatgtttcgtccccgaaggagtacttcattaggagtaac 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910  gagtatgattccggggtggatgatgtttcgtccccgaaggagtacttcattaggagtaac 969

                                                                        
Query: 196  aggatgaacacacatgtcttgcctgaatatgttttgagtttcaggattccccccacaggt 255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970  aggatgaacacacatgtcttgcctgaatatgttttgagtttcaggattccccccacaggt 1029



 Score =  295 bits (149), Expect = 1e-79
 Identities = 149/149 (100%)
 Strand = Plus / Plus

                                                                        
Query: 351  aggtcgtgctgtgaatgttgctgctgctcgcgagccttcgaggccgaaatccccttgggt 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 aggtcgtgctgtgaatgttgctgctgctcgcgagccttcgaggccgaaatccccttgggt 1085

                                                                        
Query: 411  tccattcccagcactgatttcagcgctgtccaagattttgcctcagcatgatatggccat 470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 tccattcccagcactgatttcagcgctgtccaagattttgcctcagcatgatatggccat 1145

                                         
Query: 471  cgttttgaagcttcaaaaagattatagag 499
            |||||||||||||||||||||||||||||
Sbjct: 1146 cgttttgaagcttcaaaaagattatagag 1174