Miyakogusa Predicted Gene

Lj4g3v1477210.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1477210.2 tr|Q6K281|Q6K281_ORYSJ GDSL-motif
lipase/hydrolase protein-like OS=Oryza sativa subsp. japonica
GN=P,49.5,2e-19,no description,Esterase, SGNH hydrolase-type,
subgroup; SGNH hydrolase,Esterase, SGNH hydrolase-type,CUFF.49298.2
         (507 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68534 weakly similar to UniRef100_A7PCY9 Cluster: Chr...   831   0.0  

>gnl|LJGI|TC68534 weakly similar to UniRef100_A7PCY9 Cluster: Chromosome chr17
           scaffold_12, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 960

 Score =  831 bits (419), Expect = 0.0
 Identities = 422/423 (99%)
 Strand = Plus / Plus

                                                                       
Query: 40  agatgggctatgttcttgctgcaccatctcttccctctggacacaactaaacaacctctt 99
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agatgggctatgttcttgctgcaccatctcttccctctggacacaactaaacaacctctt 261

                                                                       
Query: 100 gccaccacaattttctttggtgctaatgatgctgcattgtttggaagaactagtgaaaag 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gccaccacaattttctttggtgctaatgatgctgcattgtttggaagaactagtgaaaag 321

                                                                       
Query: 160 caacatgtacctattgaagagtacaaagaaaacctcagaaaaatggtgcaacacttacag 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 caacatgtacctattgaagagtacaaagaaaacctcagaaaaatggtgcaacacttacag 381

                                                                       
Query: 220 atatgctcaccaacaatgctaattgtgctcattactcaacctccaatttatgaggaaggg 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atatgctcaccaacaatgctaattgtgctcattactcaacctccaatttatgaggaaggg 441

                                                                       
Query: 280 cgtcgggcatatgcaatatccttatacggtgagaatgctagaaaattgcctgaaagaaca 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cgtcgggcatatgcaatatccttatacggtgagaatgctagaaaattgcctgaaagaaca 501

                                                                       
Query: 340 aatgaagtggctggtcaatatgcaaacgcgtgtgttgagatagctaaggaaatgggcgtg 399
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aatgaagcggctggtcaatatgcaaacgcgtgtgttgagatagctaaggaaatgggcgtg 561

                                                                       
Query: 400 ccgtatatcaatctatggtctaaaatgcaagaaacagatggctggcaaacaaaatttttg 459
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccgtatatcaatctatggtctaaaatgcaagaaacagatggctggcaaacaaaatttttg 621

              
Query: 460 aga 462
           |||
Sbjct: 622 aga 624



 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                    
Query: 1   atggatggggtgcttcccttgccaatgcctataatcgcaag 41
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atggatggggtgcttcccttgccaatgcctataatcgcaag 162