Miyakogusa Predicted Gene
- Lj4g3v1474120.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1474120.2 Non Chatacterized Hit- tr|I1JX93|I1JX93_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38894
PE,58.41,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; ZINC
FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN,CUFF.49286.2
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043725 similar to UniRef100_A7PCW6 Cluster: Chromosom... 539 e-152
gnl|LJGI|TC80646 similar to UniRef100_A7PCW6 Cluster: Chromosome... 206 3e-52
>gnl|LJGI|BP043725 similar to UniRef100_A7PCW6 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 365
Score = 539 bits (272), Expect = e-152
Identities = 274/275 (99%)
Strand = Plus / Minus
Query: 145 aatccatcagctgggcacatggaagtcataaatggcctagagcatggaaccactaatatg 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aatccatcagctgggcacatggaagtcataaatggcctagagcatggaaccactaatatg 306
Query: 205 tccttgctgctgcagtggtctccatattcatcagaagcagaacttctgaaacaatttgtt 264
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcnttgctgctgcagtggtctccatattcatcagaagcagaacttctgaaacaatttgtt 246
Query: 265 aacattggacatcatggtacgaaaattattatcttcaatttatggtgcaaccatgatggg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aacattggacatcatggtacgaaaattattatcttcaatttatggtgcaaccatgatggg 186
Query: 325 gatttggaactagactttgatactgatcccgaggatattcatattgctgggcacttcaag 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatttggaactagactttgatactgatcccgaggatattcatattgctgggcacttcaag 126
Query: 385 aaaactgatacaacttctgcgaggaagaagatagt 419
|||||||||||||||||||||||||||||||||||
Sbjct: 125 aaaactgatacaacttctgcgaggaagaagatagt 91
Score = 83.8 bits (42), Expect = 3e-15
Identities = 49/50 (98%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 418 gtttacttgtctatattgtacttgcggataccagaacattttaggattat 467
||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 49 gtttacttgtctatattgtacttgcggataccagaac-ttttaggattat 1
>gnl|LJGI|TC80646 similar to UniRef100_A7PCW6 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1124
Score = 206 bits (104), Expect = 3e-52
Identities = 354/435 (81%), Gaps = 3/435 (0%)
Strand = Plus / Plus
Query: 421 tacttgtctatattgtacttgcggataccagaacattttaggattattttgcgagggcaa 480
|||||||| |||||||||||||||||||| || ||||| |||| || |||||| ||
Sbjct: 560 tacttgtcaatattgtacttgcggataccggat-attttc--attacattacgagggaaa 616
Query: 481 gttgtgaagctacataatattgcagacgatcttaaacatattcagtatattttgtataca 540
|||||||||| |||||| ||||| || ||||||||| || | | ||||| || |||| |
Sbjct: 617 gttgtgaagccacataacattgctgatgatcttaaatatcctgaatatatattatataga 676
Query: 541 ccacaaagtggtggttcaaaaaaggcaacttttgtgacaacaattggatttcttaaggaa 600
|||||| |||||| | | |||| || |||| ||||||||||||||||||||||||
Sbjct: 677 ccacaagttggtggaaatatagaggccacaattgtaacaacaattggatttcttaaggaa 736
Query: 601 gctccggaagttaacatccatggcttcaatatatatcacaaaaatcggctgatactgcca 660
||||| | || | ||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 737 gctcctcatgtcactttccatggtttcaacgtatatcacaaaaatcggctgatactgcca 796
Query: 661 ttttggccggctgtgagctatggaaaaaataggggtaggggagttgtgggtgtcttgcaa 720
||||||| || ||| |||||| | | | ||||||||| |||||||| |||||| |||||
Sbjct: 797 ttttggcaggttgtaagctatatagacagtaggggtagaggagttgttggtgtcctgcaa 856
Query: 721 gcagattatattgagccgactcataataagcaagattttgagagatcttctctgtctcag 780
||||| | | ||||||| ||||||||||| ||||||||||||||| |||| |||| |||
Sbjct: 857 gcagactttgttgagccaactcataataaacaagattttgagagaacttccctgtttcaa 916
Query: 781 aagcttgaaatacgcttaaaggagatggcactggaatactgggattatcactgtcatcta 840
||||||||| || || ||||| ||| || |||||||||||| || || ||| | |||
Sbjct: 917 aagcttgaagcccgattgaaggaaatgacatgggaatactgggactaccattgtaaacta 976
Query: 841 attggatatccggaa 855
||||| |||| ||||
Sbjct: 977 attgggtatcaggaa 991
Score = 143 bits (72), Expect = 3e-33
Identities = 144/168 (85%)
Strand = Plus / Plus
Query: 197 ctaatatgtccttgctgctgcagtggtctccatattcatcagaagcagaacttctgaaac 256
||||| |||| ||| || ||| |||||| |||||||||||||||||||||||||| ||||
Sbjct: 294 ctaatttgtcattgatggtgcggtggtccccatattcatcagaagcagaacttctaaaac 353
Query: 257 aatttgttaacattggacatcatggtacgaaaattattatcttcaatttatggtgcaacc 316
||||| | | |||||| ||||||||| ||| || |||||| |||||||||||||||
Sbjct: 354 aatttaatgatattggatctcatggtactaaagttgttatctacaatttatggtgcaatg 413
Query: 317 atgatggggatttggaactagactttgatactgatcccgaggatattc 364
||||||| ||||||||||||||||||| || ||||| ||||||||||
Sbjct: 414 atgatggcaatttggaactagactttgacacagatcctgaggatattc 461