Miyakogusa Predicted Gene
- Lj4g3v1440870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1440870.1 tr|I1K037|I1K037_SOYBN Histone deacetylase
OS=Glycine max PE=3 SV=1,83.33,0,Arginase/deacetylase,NULL; seg,NULL;
HISTONE DEACETYLASE,NULL; HISTONE DEACETYLASE,Histone
deacetyla,CUFF.49279.1
(1410 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59998 homologue to UniRef100_A7PCT8 Cluster: Chromoso... 1394 0.0
gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone de... 1035 0.0
gnl|LJGI|TC59692 similar to UniRef100_A7PCT8 Cluster: Chromosome... 278 9e-74
gnl|LJGI|TC79913 similar to UniRef100_Q9FML2 Cluster: Histone de... 192 4e-48
gnl|LJGI|TC60853 similar to UniRef100_A8MSD0 Cluster: Uncharacte... 72 1e-11
gnl|LJGI|TC65477 homologue to UniRef100_A7PQG5 Cluster: Chromoso... 68 2e-10
gnl|LJGI|TC57708 homologue to UniRef100_A7P8U9 Cluster: Chromoso... 68 2e-10
>gnl|LJGI|TC59998 homologue to UniRef100_A7PCT8 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (64%)
Length = 774
Score = 1394 bits (703), Expect = 0.0
Identities = 703/703 (100%)
Strand = Plus / Plus
Query: 1 atggttatggaggaggagagaaagatagaggaaggtgcttcccttccatcgggaccagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atggttatggaggaggagagaaagatagaggaaggtgcttcccttccatcgggaccagac 131
Query: 61 gcgaagaagaagagagtcacctacttctacgaaccatcgatcggcgattactactacggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcgaagaagaagagagtcacctacttctacgaaccatcgatcggcgattactactacggc 191
Query: 121 caaggccacccgatgaaaccccaccggatgcgtatggcccacaatctcatcgtccattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 caaggccacccgatgaaaccccaccggatgcgtatggcccacaatctcatcgtccattac 251
Query: 181 tccctccaccgccgcatggagatcaatcgccccttccccgccggccctgacgacatccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tccctccaccgccgcatggagatcaatcgccccttccccgccggccctgacgacatccgc 311
Query: 241 cgcttccactccgacgactacgtcgagtttcttgcctctgtcacccctgagactctctcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cgcttccactccgacgactacgtcgagtttcttgcctctgtcacccctgagactctctcg 371
Query: 301 gagccaatcttcgcccgccagcttaagcgcttcaacgttggtgaggattgtcctattttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gagccaatcttcgcccgccagcttaagcgcttcaacgttggtgaggattgtcctattttt 431
Query: 361 gatggtcttttcaattactgccaggcctccgccggtggctccctcggcgccgccgtcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gatggtcttttcaattactgccaggcctccgccggtggctccctcggcgccgccgtcaag 491
Query: 421 ctcaaccgcggtgaggctgacattgctatcaattgggctgggggcatgcatcatgctaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctcaaccgcggtgaggctgacattgctatcaattgggctgggggcatgcatcatgctaag 551
Query: 481 aagtgtgaagcttctggcttctgttatgtcaatgacattgtgcttggtatcctcgagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aagtgtgaagcttctggcttctgttatgtcaatgacattgtgcttggtatcctcgagctt 611
Query: 541 ctcaaagttcataggcgtgtgctgtacattgacatagatgttcaccatggtgatggtgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ctcaaagttcataggcgtgtgctgtacattgacatagatgttcaccatggtgatggtgtg 671
Query: 601 gaagaggccttctacacaactgatagagtgatgacagtatctttccataagtttggggac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaagaggccttctacacaactgatagagtgatgacagtatctttccataagtttggggac 731
Query: 661 tttttccccggcactggacacatcaaggacattggagtgggct 703
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tttttccccggcactggacacatcaaggacattggagtgggct 774
>gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone deacetylase; n=2; Zea
mays|Rep: Histone deacetylase - Zea mays (Maize), partial
(27%)
Length = 927
Score = 1035 bits (522), Expect = 0.0
Identities = 525/526 (99%)
Strand = Plus / Plus
Query: 885 gaaaggtcatgcagattgccttcgtttcgttaaatctttcaatgttcctctaatgattgt 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaggtcatgcagattgccttcgtttcgttaaatctttcaatgttcctctaatgattgt 60
Query: 945 tggtggcggaggatatacgattcggaatgtggctcgttgttggtgttatgagactgcagt 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtggcggaggatatacgattcggaatgtggctcgttgttggtgttatgagactgcagt 120
Query: 1005 agcagtaggagtggagcctgataacaagctgccttacaatgaatactatgagtattttgg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcagtaggagtggagcctgataacaagctgccttacaatgaatactatgagtattttgg 180
Query: 1065 cccagattatactctccatgttgatccaagcaacatggagaacctaaacacacccaagga 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccagattatactctccatgttgatccaagcaacatggagaacctaaacacacccaagga 240
Query: 1125 tttggaaagaataaggaacactttactagaacagatttcccgacttccccatgctcccag 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttggaaagaataaggaacactttactagaacagatttcccgacttccccatgctcccag 300
Query: 1185 tgcaccttttcagacaacaccatcaaccacagaagtgccagaagaggaggaagagggcat 1244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 tgcaccttttcagacaacaccatcaaccacagaagtgccagaggaggaggaagagggcat 360
Query: 1245 ggatagaagaccacagtgtcgcaagtggaatggtgaagagtatgattctgattttgatga 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggatagaagaccacagtgtcgcaagtggaatggtgaagagtatgattctgattttgatga 420
Query: 1305 agatgaaaaggatgacctcaagcactcaaaattaactgaccatatgagggatgtttcaaa 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatgaaaaggatgacctcaagcactcaaaattaactgaccatatgagggatgtttcaaa 480
Query: 1365 tgacatggaagaagagaagccagtagtgcatccaccatcttgatgt 1410
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgacatggaagaagagaagccagtagtgcatccaccatcttgatgt 526
>gnl|LJGI|TC59692 similar to UniRef100_A7PCT8 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 816
Score = 278 bits (140), Expect = 9e-74
Identities = 499/619 (80%), Gaps = 6/619 (0%)
Strand = Plus / Plus
Query: 79 acctacttctacgaaccatcgatcggcgattactactacggccaaggccacccgatgaaa 138
||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 183 acctatttctacgaaccccaaatcggcgactactactacggccaaggccacccaatgaaa 242
Query: 139 ccccaccggatgcgtatggcccacaatctcatcgtccattactccctccaccgccgcatg 198
|| ||| | || || ||||| ||| | |||||| || | ||||||||| ||||||||||
Sbjct: 243 ccgcacagaatccgcatggcgcacgagctcatcatcaactactccctcttccgccgcatg 302
Query: 199 gagatcaatcgccccttccccgccggccctgacgacatccgccgcttccactccgacgac 258
||||||| || || | |||||||| | || |||||| ||||||| ||||||||||||
Sbjct: 303 cagatcaaccgtccataccccgccgccgtcgaggacatctgccgctttcactccgacgac 362
Query: 259 tacgtcgagtttcttgcctctgtcacccctgagactctctcggagccaatcttcgc---- 314
|||||||| || || ||||| ||| | || || | ||||| ||||| | | | |
Sbjct: 363 tacgtcgacttcctcgcctccgtctcgccggaaatcctctccgagcccacccactctcac 422
Query: 315 --ccgccagcttaagcgcttcaacgttggtgaggattgtcctatttttgatggtcttttc 372
||||||||| ||||||| |||||| |||||||| |||||| |||| || || || |||
Sbjct: 423 taccgccagctcaagcgctacaacgtcggtgaggactgtcctgttttcgacggactcttc 482
Query: 373 aattactgccaggcctccgccggtggctccctcggcgccgccgtcaagctcaaccgcggt 432
||| ||||||||| ||||||||||| ||| ||||||||||||||| |||||||| |
Sbjct: 483 gatttctgccaggcttccgccggtggatccatcggcgccgccgtcacgctcaaccactcc 542
Query: 433 gaggctgacattgctatcaattgggctgggggcatgcatcatgctaagaagtgtgaagct 492
|| ||||| || ||||| ||||| || ||| |||| ||||| |||||| ||| ||
Sbjct: 543 ctcgccgacatcgcgatcaactgggccggtggcttgcaccatgcgaagaaggctgaggcc 602
Query: 493 tctggcttctgttatgtcaatgacattgtgcttggtatcctcgagcttctcaaagttcat 552
||||| || || || ||||||||||| || || || || |||||||||||||| |||||
Sbjct: 603 tctgggttttgctacgtcaatgacatcgtcctgggaattctcgagcttctcaaggttcac 662
Query: 553 aggcgtgtgctgtacattgacatagatgttcaccatggtgatggtgtggaagaggccttc 612
|||||||||||||| |||| || |||||||||||||| ||||| || || ||||| |||
Sbjct: 663 aggcgtgtgctgtatgttgatattgatgttcaccatggagatggcgttgaggaggcattc 722
Query: 613 tacacaactgatagagtgatgacagtatctttccataagtttggggactttttccccggc 672
||||| |||||||||||||||||||| || || || ||||| ||| | |||||||| ||
Sbjct: 723 tacactactgatagagtgatgacagtgtcatttcacaagttcgggaattttttcccagga 782
Query: 673 actggacacatcaaggaca 691
||||| |||||||||||||
Sbjct: 783 actgggcacatcaaggaca 801
>gnl|LJGI|TC79913 similar to UniRef100_Q9FML2 Cluster: Histone deacetylase 6; n=1;
Arabidopsis thaliana|Rep: Histone deacetylase 6 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 366
Score = 192 bits (97), Expect = 4e-48
Identities = 297/361 (82%), Gaps = 2/361 (0%)
Strand = Plus / Plus
Query: 868 tgcttcaacttgtctgtgaaaggtcatgcagattgccttcgtttcgttaaatctttcaat 927
|||||||||||||||||||| |||||||||||||||||||| ||| ||| ||||| ||||
Sbjct: 7 tgcttcaacttgtctgtgaagggtcatgcagattgccttcgcttccttagatcttacaat 66
Query: 928 gttcctctaatgattgttggtggcggaggatatacgattcggaatgtggctcgttgttgg 987
|| ||||||||| | | ||||| |||||||| ||| | |||| || ||||| || |||
Sbjct: 67 gtccctctaatgctcttgggtgggggaggatacacggtccggagcgttgctcgatgctgg 126
Query: 988 tgttatgagactgcagtagcagtaggagtggagcctga-taacaagctgccttacaatga 1046
|||||||||||||| || ||||||||||||||| |||| ||| ||| |||| | |||| |
Sbjct: 127 tgttatgagactgcggtggcagtaggagtggag-ctgagtaataagttgccattcaatca 185
Query: 1047 atactatgagtattttggcccagattatactctccatgttgatccaagcaacatggagaa 1106
||| ||||| | ||||||||| || ||||| || ||||| || || | ||||| |||
Sbjct: 186 atattatgaattttttggccctgagtatacacttcatgtcagccctagaagcatggcgaa 245
Query: 1107 cctaaacacacccaaggatttggaaagaataaggaacactttactagaacagatttcccg 1166
||||||||||||| ||||||||||| || ||||| || || || || |||||| |
Sbjct: 246 cctaaacacaccccaggatttggaactgattaggaatctgttgcttgagcaaatttccag 305
Query: 1167 acttccccatgctcccagtgcaccttttcagacaacaccatcaaccacagaagtgccaga 1226
||| |||||||||||||| |||||||||||||||||| ||||||| |||||| |||||
Sbjct: 306 actcccccatgctcccagcataccttttcagacaacaccgtcaaccatagaagttccaga 365
Query: 1227 a 1227
|
Sbjct: 366 a 366
>gnl|LJGI|TC60853 similar to UniRef100_A8MSD0 Cluster: Uncharacterized protein
At4g38130.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At4g38130.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (80%)
Length = 1708
Score = 71.9 bits (36), Expect = 1e-11
Identities = 174/220 (79%)
Strand = Plus / Plus
Query: 442 attgctatcaattgggctgggggcatgcatcatgctaagaagtgtgaagcttctggcttc 501
|||||| ||||||||||||| || |||||||||| ||||||||||| || ||||| ||
Sbjct: 582 attgctgtcaattgggctggtgggctgcatcatgccaagaagtgtgaggcatctggattt 641
Query: 502 tgttatgtcaatgacattgtgcttggtatcctcgagcttctcaaagttcataggcgtgtg 561
|| ||||||||||| || || || | || | || ||||| ||| ||| ||||||
Sbjct: 642 tgctatgtcaatgatatagtcctcgcaattttagaacttcttaaacagcatgagcgtgtt 701
Query: 562 ctgtacattgacatagatgttcaccatggtgatggtgtggaagaggccttctacacaact 621
|| || | ||||| ||| | |||||||| ||||||||||| || || || |||||||||
Sbjct: 702 ctatatgtggacattgatatccaccatggggatggtgtggaggaagctttttacacaact 761
Query: 622 gatagagtgatgacagtatctttccataagtttggggact 661
|| ||||| ||||| || || |||||||| ||||| ||||
Sbjct: 762 gacagagttatgaccgtttcattccataaatttggtgact 801
>gnl|LJGI|TC65477 homologue to UniRef100_A7PQG5 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 730
Score = 67.9 bits (34), Expect = 2e-10
Identities = 139/174 (79%)
Strand = Plus / Plus
Query: 442 attgctatcaattgggctgggggcatgcatcatgctaagaagtgtgaagcttctggcttc 501
|||||||| || |||||||| || | |||||||| ||||| ||||| || ||||||||
Sbjct: 550 attgctataaactgggctggtggactacatcatgccaagaaatgtgaggcatctggcttt 609
Query: 502 tgttatgtcaatgacattgtgcttggtatcctcgagcttctcaaagttcataggcgtgtg 561
||||| |||||||| | || | || ||| | |||||||| ||| |||| || ||
Sbjct: 610 tgttacatcaatgacctggttttaggaatcttggagcttcttaaatatcatgctcgggtt 669
Query: 562 ctgtacattgacatagatgttcaccatggtgatggtgtggaagaggccttctac 615
|||| ||||| ||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 670 ttgtatattgatatagacgtgcaccatggtgatggtgtggaagaagccttctac 723
>gnl|LJGI|TC57708 homologue to UniRef100_A7P8U9 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 832
Score = 67.9 bits (34), Expect = 2e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 442 attgctatcaattgggctgggggcatgcatcatgctaagaagtgtgaagcttctggcttc 501
|||||| ||||||||||||| || |||||||||| ||||||||||| || ||||| ||
Sbjct: 663 attgctgtcaattgggctggtgggctgcatcatgccaagaagtgtgaggcatctggattt 722
Query: 502 tgttatgtcaatga 515
|| |||||||||||
Sbjct: 723 tgctatgtcaatga 736