Miyakogusa Predicted Gene
- Lj4g3v1440790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1440790.1 tr|I1K037|I1K037_SOYBN Histone deacetylase
OS=Glycine max PE=3 SV=1,88.7,0,seg,NULL; Arginase/deacetylase,NULL;
no description,Histone deacetylase domain;
Hist_deacetyl,Histon,CUFF.49262.1
(1032 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59998 homologue to UniRef100_A7PCT8 Cluster: Chromoso... 1029 0.0
gnl|LJGI|TC59692 similar to UniRef100_A7PCT8 Cluster: Chromosome... 285 3e-76
gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone de... 174 7e-43
gnl|LJGI|TC79913 similar to UniRef100_Q9FML2 Cluster: Histone de... 109 3e-23
gnl|LJGI|TC60853 similar to UniRef100_A8MSD0 Cluster: Uncharacte... 78 1e-13
>gnl|LJGI|TC59998 homologue to UniRef100_A7PCT8 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (64%)
Length = 774
Score = 1029 bits (519), Expect = 0.0
Identities = 639/679 (94%)
Strand = Plus / Plus
Query: 37 atagacgaaggtgcttcacttccatcaggaccagacgcaaagaagagaagagtcacctac 96
||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||
Sbjct: 96 atagaggaaggtgcttcccttccatcgggaccagacgcgaagaagaagagagtcacctac 155
Query: 97 ttctacgaaccatcaatcggtgattactactacggccaaggccacccgatgaaaccccac 156
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttctacgaaccatcgatcggcgattactactacggccaaggccacccgatgaaaccccac 215
Query: 157 cgtatgcgtatggcccacaatctcatcgtctattactccctccaccgccgcatggagatc 216
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 216 cggatgcgtatggcccacaatctcatcgtccattactccctccaccgccgcatggagatc 275
Query: 217 aaccgccccttccccgccggccctgatgacatccgccgcttccactccgacgactacgtt 276
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 276 aatcgccccttccccgccggccctgacgacatccgccgcttccactccgacgactacgtc 335
Query: 277 gacttccttgcctctgtcacccctgagaccctctctgagccaatcttcgcccgccagctc 336
|| || ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 336 gagtttcttgcctctgtcacccctgagactctctcggagccaatcttcgcccgccagctt 395
Query: 337 aagcgcttcaatgttggtgatgactgtcctatctttgatggtctgtttaattactgccag 396
||||||||||| |||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 396 aagcgcttcaacgttggtgaggattgtcctatttttgatggtcttttcaattactgccag 455
Query: 397 gcctccgctggtggctccctcggcgccgccgtcaagctcaaccgcggtgaagctgacatt 456
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 456 gcctccgccggtggctccctcggcgccgccgtcaagctcaaccgcggtgaggctgacatt 515
Query: 457 gctattaattgggctgggggcatgcaccatgctaagaagtgtgaagcttctggcttctgt 516
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 516 gctatcaattgggctgggggcatgcatcatgctaagaagtgtgaagcttctggcttctgt 575
Query: 517 tacgttaatgacattgttcttggtatcctcgagcttctcaaagttcacaggcgtgtgctg 576
|| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 576 tatgtcaatgacattgtgcttggtatcctcgagcttctcaaagttcataggcgtgtgctg 635
Query: 577 tacattgacattgatgttcaccatggtgatggtgtcgaggaggccttttacacaactgat 636
||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 636 tacattgacatagatgttcaccatggtgatggtgtggaagaggccttctacacaactgat 695
Query: 637 agagtgatgacagtatctttccacaagtttggggactttttccctggcactggacacatt 696
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 696 agagtgatgacagtatctttccataagtttggggactttttccccggcactggacacatc 755
Query: 697 aaagacattggagtgggct 715
|| ||||||||||||||||
Sbjct: 756 aaggacattggagtgggct 774
>gnl|LJGI|TC59692 similar to UniRef100_A7PCT8 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 816
Score = 285 bits (144), Expect = 3e-76
Identities = 494/611 (80%), Gaps = 6/611 (0%)
Strand = Plus / Plus
Query: 91 acctacttctacgaaccatcaatcggtgattactactacggccaaggccacccgatgaaa 150
||||| ||||||||||| |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 183 acctatttctacgaaccccaaatcggcgactactactacggccaaggccacccaatgaaa 242
Query: 151 ccccaccgtatgcgtatggcccacaatctcatcgtctattactccctccaccgccgcatg 210
|| ||| | || || ||||| ||| | |||||| || | ||||||||| ||||||||||
Sbjct: 243 ccgcacagaatccgcatggcgcacgagctcatcatcaactactccctcttccgccgcatg 302
Query: 211 gagatcaaccgccccttccccgccggccctgatgacatccgccgcttccactccgacgac 270
|||||||||| || | |||||||| | || |||||| ||||||| ||||||||||||
Sbjct: 303 cagatcaaccgtccataccccgccgccgtcgaggacatctgccgctttcactccgacgac 362
Query: 271 tacgttgacttccttgcctctgtcacccctgagaccctctctgagccaatcttcgc---- 326
||||| |||||||| ||||| ||| | || || | |||||| ||||| | | | |
Sbjct: 363 tacgtcgacttcctcgcctccgtctcgccggaaatcctctccgagcccacccactctcac 422
Query: 327 --ccgccagctcaagcgcttcaatgttggtgatgactgtcctatctttgatggtctgttt 384
||||||||||||||||| ||| || ||||| ||||||||| | || || || || ||
Sbjct: 423 taccgccagctcaagcgctacaacgtcggtgaggactgtcctgttttcgacggactcttc 482
Query: 385 aattactgccaggcctccgctggtggctccctcggcgccgccgtcaagctcaaccgcggt 444
||| ||||||||| ||||| ||||| ||| ||||||||||||||| |||||||| |
Sbjct: 483 gatttctgccaggcttccgccggtggatccatcggcgccgccgtcacgctcaaccactcc 542
Query: 445 gaagctgacattgctattaattgggctgggggcatgcaccatgctaagaagtgtgaagct 504
|| ||||| || || || ||||| || ||| |||||||||| |||||| ||| ||
Sbjct: 543 ctcgccgacatcgcgatcaactgggccggtggcttgcaccatgcgaagaaggctgaggcc 602
Query: 505 tctggcttctgttacgttaatgacattgttcttggtatcctcgagcttctcaaagttcac 564
||||| || || ||||| |||||||| || || || || |||||||||||||| ||||||
Sbjct: 603 tctgggttttgctacgtcaatgacatcgtcctgggaattctcgagcttctcaaggttcac 662
Query: 565 aggcgtgtgctgtacattgacattgatgttcaccatggtgatggtgtcgaggaggccttt 624
|||||||||||||| |||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct: 663 aggcgtgtgctgtatgttgatattgatgttcaccatggagatggcgttgaggaggcattc 722
Query: 625 tacacaactgatagagtgatgacagtatctttccacaagtttggggactttttccctggc 684
||||| |||||||||||||||||||| || || |||||||| ||| | |||||||| ||
Sbjct: 723 tacactactgatagagtgatgacagtgtcatttcacaagttcgggaattttttcccagga 782
Query: 685 actggacacat 695
||||| |||||
Sbjct: 783 actgggcacat 793
>gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone deacetylase; n=2; Zea
mays|Rep: Histone deacetylase - Zea mays (Maize), partial
(27%)
Length = 927
Score = 174 bits (88), Expect = 7e-43
Identities = 124/136 (91%)
Strand = Plus / Plus
Query: 897 gaaagggcatgcagattgtcttcgtttcgttagatctttcaatgttcctctcatggtcgt 956
|||||| ||||||||||| ||||||||||||| |||||||||||||||||| ||| | ||
Sbjct: 1 gaaaggtcatgcagattgccttcgtttcgttaaatctttcaatgttcctctaatgattgt 60
Query: 957 gggtggtggaggatatacaattcggaatgtcgctcgctgttggtgttatgagacggcagt 1016
||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 61 tggtggcggaggatatacgattcggaatgtggctcgttgttggtgttatgagactgcagt 120
Query: 1017 agcagtaggagtggag 1032
||||||||||||||||
Sbjct: 121 agcagtaggagtggag 136
>gnl|LJGI|TC79913 similar to UniRef100_Q9FML2 Cluster: Histone deacetylase 6; n=1;
Arabidopsis thaliana|Rep: Histone deacetylase 6 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 366
Score = 109 bits (55), Expect = 3e-23
Identities = 127/151 (84%)
Strand = Plus / Plus
Query: 882 cttcaacttgtcagtgaaagggcatgcagattgtcttcgtttcgttagatctttcaatgt 941
|||||||||||| ||||| || ||||||||||| ||||| ||| ||||||||| ||||||
Sbjct: 9 cttcaacttgtctgtgaagggtcatgcagattgccttcgcttccttagatcttacaatgt 68
Query: 942 tcctctcatggtcgtgggtggtggaggatatacaattcggaatgtcgctcgctgttggtg 1001
||||| ||| || ||||||| |||||||| || | |||| || ||||| || |||||
Sbjct: 69 ccctctaatgctcttgggtgggggaggatacacggtccggagcgttgctcgatgctggtg 128
Query: 1002 ttatgagacggcagtagcagtaggagtggag 1032
||||||||| || || |||||||||||||||
Sbjct: 129 ttatgagactgcggtggcagtaggagtggag 159
>gnl|LJGI|TC60853 similar to UniRef100_A8MSD0 Cluster: Uncharacterized protein
At4g38130.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At4g38130.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (80%)
Length = 1708
Score = 77.8 bits (39), Expect = 1e-13
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 583 gacattgatgttcaccatggtgatggtgtcgaggaggccttttacacaactgatagagtg 642
||||||||| | |||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 711 gacattgatatccaccatggggatggtgtggaggaagctttttacacaactgacagagtt 770
Query: 643 atgacagtatctttccacaagtttggggactttttccctggcactgg 689
||||| || || ||||| || ||||| |||| ||| ||||| |||||
Sbjct: 771 atgaccgtttcattccataaatttggtgactattttcctggtactgg 817