Miyakogusa Predicted Gene
- Lj4g3v1440760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1440760.1 Non Chatacterized Hit- tr|I1K039|I1K039_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.15,0,SANT SWI3,
ADA2, N-CoR and TFIIIB'' DNA-bin,SANT/Myb domain;
Myb_DNA-binding,SANT/Myb domain; Homeo,CUFF.49256.1
(1092 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW624444 homologue to UniRef100_A7PCT7 Cluster: Chromos... 414 e-115
gnl|LJGI|GO026297 homologue to UniRef100_Q0PJD6 Cluster: MYB tra... 153 3e-36
gnl|LJGI|TC81472 homologue to UniRef100_Q2LME4 Cluster: MYB20; n... 58 1e-07
gnl|LJGI|TC65278 UniRef100_A7BJW2 Cluster: MYB-related protein; ... 58 1e-07
gnl|LJGI|TC75066 similar to UniRef100_A7Q1U0 Cluster: Chromosome... 54 2e-06
gnl|LJGI|GO012149 similar to UniRef100_A7R2L2 Cluster: Chromosom... 52 7e-06
gnl|LJGI|NP675421 GB|AB108650.1|BAC75673.1 transcription factor ... 52 7e-06
gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome... 52 7e-06
>gnl|LJGI|BW624444 homologue to UniRef100_A7PCT7 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 487
Score = 414 bits (209), Expect = e-115
Identities = 209/209 (100%)
Strand = Plus / Plus
Query: 1 atgggtcgccattcctgttgtgtgaagcaaaagttgaggaaaggtttatggtcccctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atgggtcgccattcctgttgtgtgaagcaaaagttgaggaaaggtttatggtcccctgaa 338
Query: 61 gaagatgagaagctcttcaatcacataaccagatttggtgttggttgctggagttctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaagatgagaagctcttcaatcacataaccagatttggtgttggttgctggagttctgtt 398
Query: 121 cccaaacaagctggactgcaaagatgtggaaagagttgcaggttgagatggataaactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cccaaacaagctggactgcaaagatgtggaaagagttgcaggttgagatggataaactac 458
Query: 181 ttgaggcctgatttgaagagaggcatgtt 209
|||||||||||||||||||||||||||||
Sbjct: 459 ttgaggcctgatttgaagagaggcatgtt 487
>gnl|LJGI|GO026297 homologue to UniRef100_Q0PJD6 Cluster: MYB transcription factor
MYB160; n=1; Glycine max|Rep: MYB transcription factor
MYB160 - Glycine max (Soybean), partial (60%)
Length = 351
Score = 153 bits (77), Expect = 3e-36
Identities = 239/293 (81%)
Strand = Plus / Plus
Query: 40 aaaggtttatggtcccctgaagaagatgagaagctcttcaatcacataaccagatttggt 99
|||||| | ||||| || || |||||||| |||||||| |||||||| |||| | |||
Sbjct: 12 aaaggtctctggtctccagaggaagatgaaaagctcttgaatcacatcaccaaacatggc 71
Query: 100 gttggttgctggagttctgttcccaaacaagctggactgcaaagatgtggaaagagttgc 159
||| |||||||| || || || |||| |||||| |||| || ||||| ||||| |||
Sbjct: 72 catggatgctggagctccgtcccaaaactagctggtttgcagaggtgtgggaagagctgc 131
Query: 160 aggttgagatggataaactacttgaggcctgatttgaagagaggcatgttctcacagcaa 219
|||||||| |||||||| ||| |||||||||||||||||||||| |||||||| ||
Sbjct: 132 aggttgaggtggataaattacctgaggcctgatttgaagagaggagcattctcacaacag 191
Query: 220 gaggaggatcttataatcaatcttcatgaagtccttggaaacaggtgggctcagatagca 279
|| ||| || | || || | || |||| |||||||| ||||||||||||||||| |||
Sbjct: 192 gaagagaatttgatcattgaactccatgccgtccttggcaacaggtgggctcagattgca 251
Query: 280 gcacagttaccagggagaacagataatgagattaagaatttctggaattcatg 332
|||||||||||||| ||||| || ||||||||||| ||| | |||||||||||
Sbjct: 252 gcacagttaccaggaagaactgacaatgagattaaaaatctgtggaattcatg 304
>gnl|LJGI|TC81472 homologue to UniRef100_Q2LME4 Cluster: MYB20; n=1; Malus x
domestica|Rep: MYB20 - Malus domestica (Apple) (Malus
sylvestris), partial (42%)
Length = 1348
Score = 58.0 bits (29), Expect = 1e-07
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 253 cttggaaacaggtgggctcagatagcagcacagttaccagggagaacagataatgagatt 312
||||||||||| ||| |||| || || |||| ||||| |||||||| || |||||||||
Sbjct: 308 cttggaaacagatggtctcaaattgcggcacgcttacctgggagaactgacaatgagatt 367
Query: 313 aagaatttctggaattc 329
||||| || ||||||||
Sbjct: 368 aagaacttttggaattc 384
>gnl|LJGI|TC65278 UniRef100_A7BJW2 Cluster: MYB-related protein; n=1; Lotus
japonicus|Rep: MYB-related protein - Lotus japonicus,
complete
Length = 1201
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 141 aagatgtggaaagagttgcaggttgagatggataaactacttgag 185
||||||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 291 aagatgtgggaagagttgcagattgagatggattaactatttgag 335
>gnl|LJGI|TC75066 similar to UniRef100_A7Q1U0 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 762
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 119 ttcccaaacaagctggactgcaaagatgtggaaagagttgcag 161
|||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 236 ttcccaaacaagctgggttgctaaggtgtggaaagagttgcag 278
>gnl|LJGI|GO012149 similar to UniRef100_A7R2L2 Cluster: Chromosome undetermined
scaffold_434, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_434,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (47%)
Length = 707
Score = 52.0 bits (26), Expect = 7e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 130 gctggactgcaaagatgtggaaagagttgc 159
||||| ||||||||||||||||||||||||
Sbjct: 268 gctgggctgcaaagatgtggaaagagttgc 297
>gnl|LJGI|NP675421 GB|AB108650.1|BAC75673.1 transcription factor MYB103 [Lotus
japonicus]
Length = 924
Score = 52.0 bits (26), Expect = 7e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 289 ccagggagaacagataatgagattaagaatttctggaa 326
|||||||| || |||||||||||||||||||| |||||
Sbjct: 289 ccagggaggactgataatgagattaagaatttatggaa 326
>gnl|LJGI|TC72932 similar to UniRef100_A7NUE1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 1107
Score = 52.0 bits (26), Expect = 7e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 274 atagcagcacagttaccagggagaacagataatgagattaagaatttctggaattcatgt 333
||||||||||||||||| ||| | ||||||||||| || ||||| | |||||| || |
Sbjct: 361 atagcagcacagttacctgggcgcacagataatgatataaagaactactggaacacaagg 420
Query: 334 ttgaagaagaagct 347
|||||||||||||
Sbjct: 421 ctgaagaagaagct 434