Miyakogusa Predicted Gene
- Lj4g3v1440690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1440690.1 Non Chatacterized Hit- tr|I1K042|I1K042_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.29,0,DEAD-like
helicases superfamily,Helicase, superfamily 1/2, ATP-binding domain;
helicase superfamily ,CUFF.49253.1
(1731 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58515 similar to UniRef100_Q5N7W4 Cluster: DEAD-box A... 1762 0.0
gnl|LJGI|TC69978 homologue to UniRef100_A7PCT3 Cluster: Chromoso... 1530 0.0
gnl|LJGI|FS362474 similar to UniRef100_A7PCT3 Cluster: Chromosom... 464 e-130
>gnl|LJGI|TC58515 similar to UniRef100_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA
helicase 30; n=1; Oryza sativa Japonica Group|Rep:
DEAD-box ATP-dependent RNA helicase 30 - Oryza sativa
subsp. japonica (Rice), partial (32%)
Length = 1068
Score = 1762 bits (889), Expect = 0.0
Identities = 889/889 (100%)
Strand = Plus / Plus
Query: 1 atgaaccccttcgacaatcgatactccgattcctcttcatatcgcgatcgtcgcagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgaaccccttcgacaatcgatactccgattcctcttcatatcgcgatcgtcgcagtgat 239
Query: 61 gtaattggacctatgcggccacccgttgccagccgcgtcggtccggttccctacggtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gtaattggacctatgcggccacccgttgccagccgcgtcggtccggttccctacggtgct 299
Query: 121 ccatatgcggcccctgtacccagcggtttcggacccgccgcacacgctaacccgaatccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccatatgcggcccctgtacccagcggtttcggacccgccgcacacgctaacccgaatccg 359
Query: 181 ccgtttgttcctccttctgggggattctctgttggccgaggcggtggatttggtggtaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ccgtttgttcctccttctgggggattctctgttggccgaggcggtggatttggtggtaga 419
Query: 241 gggggtgataggaaatatgacacgggtcgttatagcggtggtggtggtggaagaggtcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gggggtgataggaaatatgacacgggtcgttatagcggtggtggtggtggaagaggtcgt 479
Query: 301 ggcggtggtagttttaggggtggaggcagaggtgggagaggcggtgggtttggaggtaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggcggtggtagttttaggggtggaggcagaggtgggagaggcggtgggtttggaggtaga 539
Query: 361 catggtggtgggtcttctaaggatgacttgaacaatatttcgctaccgaaacaagatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 catggtggtgggtcttctaaggatgacttgaacaatatttcgctaccgaaacaagatttt 599
Query: 421 aggaatctggtcccttttgagaagaatttttacattgagagccctgcggtaagggctatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aggaatctggtcccttttgagaagaatttttacattgagagccctgcggtaagggctatg 659
Query: 481 tctgaacaagaagttatgcaataccgtgcaagcagggatattactgtccaagggcaggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tctgaacaagaagttatgcaataccgtgcaagcagggatattactgtccaagggcaggat 719
Query: 541 gtgccgagacctattcggtcgtttcatgaagctagtttccctggttactgccttgaggtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gtgccgagacctattcggtcgtttcatgaagctagtttccctggttactgccttgaggtc 779
Query: 601 tttgccagattgggttttgttgagcccactccaatccaggctcagggttggcccatggct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tttgccagattgggttttgttgagcccactccaatccaggctcagggttggcccatggct 839
Query: 661 ctgacgggtagggatttgattggcattgctgagactggctcgggtaaaaccttggcgtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ctgacgggtagggatttgattggcattgctgagactggctcgggtaaaaccttggcgtat 899
Query: 721 ctgcttcctgcattagtgcatgtgaatgctcaacctcgattggttcaaggggatggtccc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ctgcttcctgcattagtgcatgtgaatgctcaacctcgattggttcaaggggatggtccc 959
Query: 781 attgtcttagttttggcaccaactagagagttagctgttcaaattcaacaagaagctatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 attgtcttagttttggcaccaactagagagttagctgttcaaattcaacaagaagctatg 1019
Query: 841 aaatttgggtcacgagcaaatattagaattacttgcatctatggcggtg 889
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 aaatttgggtcacgagcaaatattagaattacttgcatctatggcggtg 1068
>gnl|LJGI|TC69978 homologue to UniRef100_A7PCT3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1175
Score = 1530 bits (772), Expect = 0.0
Identities = 772/772 (100%)
Strand = Plus / Plus
Query: 960 aatcgatatgttggaagctcagcacacaaacctgcagagagtgacttaccttgtcttgga 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcgatatgttggaagctcagcacacaaacctgcagagagtgacttaccttgtcttgga 60
Query: 1020 tgaagctgatcgaatgttggacatgggttttgaacctcagatacggaaaattgttagcca 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaagctgatcgaatgttggacatgggttttgaacctcagatacggaaaattgttagcca 120
Query: 1080 gattcgaccagataggcagacactatactggagcgctacatggccaagggaggttgaaac 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattcgaccagataggcagacactatactggagcgctacatggccaagggaggttgaaac 180
Query: 1140 tcttgcaagacagtttctgcgcaacgcatataaggtaattattggttcaccagatctgaa 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcttgcaagacagtttctgcgcaacgcatataaggtaattattggttcaccagatctgaa 240
Query: 1200 agcaaatcattgtataaatcaagttgttgaagttgtaaccgacattgagaaatacaatag 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcaaatcattgtataaatcaagttgttgaagttgtaaccgacattgagaaatacaatag 300
Query: 1260 attgatcaaactgctgaaagaagtgatggatggtggccgaattctaatatttatggagac 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgatcaaactgctgaaagaagtgatggatggtggccgaattctaatatttatggagac 360
Query: 1320 caaaaagggatgtgaccaagttacaagacaattgagaatggaaggatggccagcactatc 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaaaagggatgtgaccaagttacaagacaattgagaatggaaggatggccagcactatc 420
Query: 1380 catccatggtgataaaaaccaggctgaaagggactgggttttggctgaatttaaaagtgg 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catccatggtgataaaaaccaggctgaaagggactgggttttggctgaatttaaaagtgg 480
Query: 1440 cagaagtccaattatgactgccactgatgttgctgcacggggtcttgatgtgaaagacat 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagaagtccaattatgactgccactgatgttgctgcacggggtcttgatgtgaaagacat 540
Query: 1500 aaaatttgtgatcaattatgattttccatcaagcctggaagattatgtccacagaattgg 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaatttgtgatcaattatgattttccatcaagcctggaagattatgtccacagaattgg 600
Query: 1560 tcgaactggtcgtgcaggggctaaaggaaccgcactcacctttttcacccatgccaatgc 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcgaactggtcgtgcaggggctaaaggaaccgcactcacctttttcacccatgccaatgc 660
Query: 1620 caaatatgctagggagctaatcaagattttacaagatgctggtcaagttgtgagtcctgc 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caaatatgctagggagctaatcaagattttacaagatgctggtcaagttgtgagtcctgc 720
Query: 1680 actgtctgttatggctcgatctgctggttctggtccacttggatccggagga 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actgtctgttatggctcgatctgctggttctggtccacttggatccggagga 772
>gnl|LJGI|FS362474 similar to UniRef100_A7PCT3 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 745
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Minus
Query: 1486 gatgtgaaagacataaaatttgtgatcaattatgattttccatcaagcctggaagattat 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gatgtgaaagacataaaatttgtgatcaattatgattttccatcaagcctggaagattat 175
Query: 1546 gtccacagaattggtcgaactggtcgtgcaggggctaaaggaaccgcactcacctttttc 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gtccacagaattggtcgaactggtcgtgcaggggctaaaggaaccgcactcacctttttc 115
Query: 1606 acccatgccaatgccaaatatgctagggagctaatcaagattttacaagatgctggtcaa 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 acccatgccaatgccaaatatgctagggagctaatcaagattttacaagatgctggtcaa 55
Query: 1666 gttgtgagtcctgcactgtctgttatggctcgatctgctggttctggtccactt 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 gttgtgagtcctgcactgtctgttatggctcgatctgctggttctggtccactt 1