Miyakogusa Predicted Gene
- Lj4g3v1438580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1438580.1 Non Chatacterized Hit- tr|I1I8H6|I1I8H6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,27.32,9e-18,coiled-coil,NULL; LRR,Leucine-rich repeat;
LEUCINE-RICH REPEAT-CONTAINING PROTEIN,NULL; LRR_8,NULL; ,CUFF.49236.1
(1584 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65672 similar to UniRef100_A7PCS2 Cluster: Chromosome... 718 0.0
gnl|LJGI|FS335430 similar to UniRef100_A7PCS2 Cluster: Chromosom... 353 2e-96
gnl|LJGI|TC67027 weakly similar to UniRef100_A7PCS2 Cluster: Chr... 101 1e-20
gnl|LJGI|TC75583 weakly similar to UniRef100_A7PCS2 Cluster: Chr... 62 1e-08
gnl|LJGI|TC74680 weakly similar to UniRef100_Q1V1U6 Cluster: Deo... 58 2e-07
>gnl|LJGI|TC65672 similar to UniRef100_A7PCS2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 645
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 1223 gggaattggatctcagcaacaatcaaattcatgcacttcctgatacatttggccgccttg 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaattggatctcagcaacaatcaaattcatgcacttcctgatacatttggccgccttg 60
Query: 1283 ataatttgaccaagctgaacttggagcagaaccctcttgaagtgccacctatggagattg 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataatttgaccaagctgaacttggagcagaaccctcttgaagtgccacctatggagattg 120
Query: 1343 taaatcatggtgtccaagccataaagtcattcatggccaagaggtggattgaaatattgg 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaatcatggtgtccaagccataaagtcattcatggccaagaggtggattgaaatattgg 180
Query: 1403 cagaggaagataggaaacacacacaggaatttccagaagaagggcagaatgggtggctaa 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagaggaagataggaaacacacacaggaatttccagaagaagggcagaatgggtggctaa 240
Query: 1463 ctcgaagtacctcctggttaaagaatgtttctgtaaatgtaactgagtatctcgaaacta 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcgaagtacctcctggttaaagaatgtttctgtaaatgtaactgagtatctcgaaacta 300
Query: 1523 ccgttatgtcccccaaagctcccagaactcccagagatgcttatcttaatcagcagctat 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgttatgtcccccaaagctcccagaactcccagagatgcttatcttaatcagcagctat 360
Query: 1583 ga 1584
||
Sbjct: 361 ga 362
>gnl|LJGI|FS335430 similar to UniRef100_A7PCS2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 677
Score = 353 bits (178), Expect = 2e-96
Identities = 285/324 (87%), Gaps = 30/324 (9%)
Strand = Plus / Plus
Query: 1263 tgatacatttggccgccttgataatttgaccaagctgaacttggagcagaaccctcttga 1322
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 tgatacatttggtcgccttcataatttgaccaagctgaacttggagcagaaccctcttga 103
Query: 1323 agtgccacctatggagattgtaaatcatggtgtccaagccataaagtcattcatggccaa 1382
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 104 agtgccat----------------tcatggtgtccaagccataaagtcattcatggccaa 147
Query: 1383 gaggtggattgaaatattggcagaggaagataggaaacacacacaggaatttccagaaga 1442
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gagggggattgagatattggcagaggaagataggaaacacacacaggaatttccagaagg 207
Query: 1443 agggcagaat--gggtggctaactcgaagtacctcctggttaaagaatgtttctgtaaat 1500
| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 208 a---cagaatatgggtggctaactcgaagtacctcctggttgaagaatgtttctgtaaat 264
Query: 1501 gtaactgagtatctcgaaactaccgttatgtcccccaaagctcccagaactcccagagat 1560
||||||||||||||| |||||||| ||||||||||||| |||||||||||||
Sbjct: 265 gtaactgagtatctcaaaactaccattatgtcccccaa---------aactcccagagat 315
Query: 1561 gcttatcttaatcagcagctatga 1584
||||||||||||||||||||||||
Sbjct: 316 gcttatcttaatcagcagctatga 339
Score = 81.8 bits (41), Expect = 1e-14
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 779 taagtggattgcaaaatcttgaggagcttaatgtgtctacaaatg 823
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 taagtggattgcaaaatcttgagcagcttaatgtgtctacaaatg 45
>gnl|LJGI|TC67027 weakly similar to UniRef100_A7PCS2 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 919
Score = 101 bits (51), Expect = 1e-20
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 atggatcccaacccaggaaccttccccattctctcctacgtcatgtcccgcctcccttcc 60
|||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 339 atggatcccaaccctggaacctttccgattctctcctacgtcatgtcccgcctcccttcc 398
Query: 61 ttc 63
|||
Sbjct: 399 ttc 401
Score = 101 bits (51), Expect = 1e-20
Identities = 114/135 (84%)
Strand = Plus / Plus
Query: 223 atctccgacgtctcgcaggccagagccgtcctgaaactgatcggcgagcggccaacccac 282
||||| |||||||||||||| | ||||||| || ||||||||||||||||| ||||||
Sbjct: 540 atctcggacgtctcgcaggctcgcaccgtcctcaacctgatcggcgagcggcccacccac 599
Query: 283 gaggaggtcgacgactccagggccaaactggcggacctcgacgcccatctttcccgccag 342
||||| |||||| || | |||| || ||||||||| |||||||||| || ||||| |||
Sbjct: 600 gaggaagtcgacaacgcgcgggcaaagctggcggacatcgacgcccagctctcccgtcag 659
Query: 343 atggaagagatcgtc 357
| ||||||||||||
Sbjct: 660 ctagaagagatcgtc 674
Score = 56.0 bits (28), Expect = 7e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 470 tgttgcagctggaggagatgcatgacgcttacgcgaagcttctcaaggacgc 521
||||||||||||| |||||||| || || |||| |||||| |||||||||||
Sbjct: 787 tgttgcagctggacgagatgcacgaggcgtacgagaagctgctcaaggacgc 838
>gnl|LJGI|TC75583 weakly similar to UniRef100_A7PCS2 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 1395
Score = 61.9 bits (31), Expect = 1e-08
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1027 ctaaacaagatacgatcccttccctcatctatttgtgagatgaagtccctccgctatctg 1086
|||||||||||||||| ||||||||||| ||| | || |||| || ||| | |||||
Sbjct: 893 ctaaacaagatacgatttcttccctcatccattggggaaatgagatctctcagatatctt 952
Query: 1087 gatgctcacttcaatgagctacatggg 1113
|||||||| ||||||||||| ||||||
Sbjct: 953 gatgctcatttcaatgagcttcatggg 979
>gnl|LJGI|TC74680 weakly similar to UniRef100_Q1V1U6 Cluster: Deoxynucleotidase; n=1;
Candidatus Pelagibacter ubique HTCC1002|Rep:
Deoxynucleotidase - Candidatus Pelagibacter ubique
HTCC1002, partial (4%)
Length = 560
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1460 taactcgaagtacctcctggttaaagaatgtttctgtaaatgtaa 1504
|||| ||||| ||||||||||| ||||||||||||| ||||||||
Sbjct: 31 taacacgaagcacctcctggttgaagaatgtttctggaaatgtaa 75