Miyakogusa Predicted Gene
- Lj4g3v1425330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1425330.1 tr|I1K051|I1K051_SOYBN Elongation factor Tu
OS=Glycine max GN=Gma.23178 PE=3 SV=1,93.62,0,GTPBP2 PROTEIN,NULL;
TRANSLATION FACTOR,NULL; GTP_EFTU,Elongation factor, GTP-binding
domain; GTP_EF,CUFF.49227.1
(1132 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72476 homologue to UniRef100_P46280 Cluster: Elongati... 2236 0.0
gnl|LJGI|TC75349 homologue to UniRef100_Q43467 Cluster: Elongati... 466 e-130
gnl|LJGI|TC73993 homologue to UniRef100_A7PCR2 Cluster: Chromoso... 291 5e-78
gnl|LJGI|TC62204 weakly similar to UniRef100_Q9C7Z9 Cluster: Ser... 88 1e-16
gnl|LJGI|CB829176 homologue to UniRef100_A6ZI76 Cluster: Elongat... 82 9e-15
gnl|LJGI|TC78032 UniRef100_Q5UE86 Cluster: Ribulose-1,5-bisphosp... 64 2e-09
>gnl|LJGI|TC72476 homologue to UniRef100_P46280 Cluster: Elongation factor Tu,
chloroplast precursor; n=1; Glycine max|Rep: Elongation
factor Tu, chloroplast precursor - Glycine max (Soybean),
partial (88%)
Length = 1927
Score = 2236 bits (1128), Expect = 0.0
Identities = 1131/1132 (99%)
Strand = Plus / Plus
Query: 1 atggccctcgcttccctcggaaacagcgcccccaagaaatacgacgaaatcgacgccgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atggccctcgcttccctcggaaacagcgcccccaagaaatacgacgaaatcgacgccgcc 533
Query: 61 cctgaagagcgcgctcgcggtatcaccatcaacaccgccaccgtcgagtacgagaccgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cctgaagagcgcgctcgcggtatcaccatcaacaccgccaccgtcgagtacgagaccgag 593
Query: 121 aatcgccactatgctcacgttgactgccccggccacgctgattacgtcaagaacatgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aatcgccactatgctcacgttgactgccccggccacgctgattacgtcaagaacatgatt 653
Query: 181 accggtgccgcccagatggacggcgctattcttgttgtctccggcgccgacggccctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 accggtgccgcccagatggacggcgctattcttgttgtctccggcgccgacggccctatg 713
Query: 241 ccgcagaccaaagagcacatcctcttggcgaagcaggttggtgtacctaacatggtggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ccgcagaccaaagagcacatcctcttggcgaagcaggttggtgtacctaacatggtggtt 773
Query: 301 ttcctcaacaagcaggaccaggttgatgatgaggagcttctgcaactcgttgaattggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttcctcaacaagcaggaccaggttgatgatgaggagcttctgcaactcgttgaattggag 833
Query: 361 gttcgggagcttctatcgtcttacgagttccctggggatgatgttcccattgtttctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gttcgggagcttctatcgtcttacgagttccctggggatgatgttcccattgtttctggt 893
Query: 421 tctgcccttttggctcttgaagctctaatggcgaaccctgctatcaaacgtggtgagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 tctgcccttttggctcttgaagctctaatggcgaaccctgctatcaaacgtggtgagaat 953
Query: 481 cagtgggtggataagatttatgagcttatggataatgtggatagctacattcctatccct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 cagtgggtggataagatttatgagcttatggataatgtggatagctacattcctatccct 1013
Query: 541 cagcgccaaaccgatcttccgtttttgtgtgccattgaagatgtgttttccatcacgggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 cagcgccaaaccgatcttccgtttttgtgtgccattgaagatgtgttttccatcacgggt 1073
Query: 601 cgtggaaccgtggccaccgggcgtattgagagggggttggttaaggttggtgacacggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 cgtggaaccgtggccaccgggcgtattgagagggggttggttaaggttggtgacacggtt 1133
Query: 661 gagattgttggtgttagggaaactaggaccactactgtgactggggtggagatgtttcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 gagattgttggtgttagggaaactaggaccactactgtgactggggtggagatgtttcag 1193
Query: 721 aagattctggatgatgccatggctggggacaatgtggggttgttgcttaggggtattcag 780
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1194 aagattctggatgatgccatggctggggacagtgtggggttgttgcttaggggtattcag 1253
Query: 781 aaggttgatattcagagagggatggttttggctaagcctggaactattacaccacacacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 aaggttgatattcagagagggatggttttggctaagcctggaactattacaccacacacc 1313
Query: 841 aagttttctgcgattgtgtacgtgttgaagaaggaagaaggtgggaggcactcgcctttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 aagttttctgcgattgtgtacgtgttgaagaaggaagaaggtgggaggcactcgcctttc 1373
Query: 901 tttgctggttacaggccacagttctacatgaggactactgatgtcactggcaaagtcacg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 tttgctggttacaggccacagttctacatgaggactactgatgtcactggcaaagtcacg 1433
Query: 961 gccattatgaatgataaggatgaggagtccaagatggtgatgcccggagaccgtgttaag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 gccattatgaatgataaggatgaggagtccaagatggtgatgcccggagaccgtgttaag 1493
Query: 1021 atggtggttgagcttattgttccagtggcttgtgaacagggaatgaggtttgctattaga 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 atggtggttgagcttattgttccagtggcttgtgaacagggaatgaggtttgctattaga 1553
Query: 1081 gaaggaggcaaaactgttggagctggtgttatccaatcgatcattgagtgaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 gaaggaggcaaaactgttggagctggtgttatccaatcgatcattgagtgaa 1605
>gnl|LJGI|TC75349 homologue to UniRef100_Q43467 Cluster: Elongation factor Tu,
chloroplast precursor; n=1; Glycine max|Rep: Elongation
factor Tu, chloroplast precursor - Glycine max (Soybean),
partial (62%)
Length = 1129
Score = 466 bits (235), Expect = e-130
Identities = 535/635 (84%)
Strand = Plus / Plus
Query: 1 atggccctcgcttccctcggaaacagcgcccccaagaaatacgacgaaatcgacgccgcc 60
||||| ||||| |||||||| ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 428 atggcgctcgcctccctcggcaacagcgcccccaagaagtacgacgagatcgacgctgcc 487
Query: 61 cctgaagagcgcgctcgcggtatcaccatcaacaccgccaccgtcgagtacgagaccgag 120
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cctgaagagcgcgcccgcggcatcaccatcaacaccgccaccgtcgagtacgagaccgag 547
Query: 121 aatcgccactatgctcacgttgactgccccggccacgctgattacgtcaagaacatgatt 180
| |||||||| || ||||| |||||||| || ||||| ||||| ||||||||||||||
Sbjct: 548 acgcgccactacgcacacgtcgactgccctggtcacgccgattatgtcaagaacatgatc 607
Query: 181 accggtgccgcccagatggacggcgctattcttgttgtctccggcgccgacggccctatg 240
|| ||||||||||||||||||||||| || || || |||||||||||||||||||| |||
Sbjct: 608 actggtgccgcccagatggacggcgccatcctcgtcgtctccggcgccgacggccccatg 667
Query: 241 ccgcagaccaaagagcacatcctcttggcgaagcaggttggtgtacctaacatggtggtt 300
|| || |||||||| ||||||||| | || || ||||||||||| |||||| |||| ||
Sbjct: 668 ccccaaaccaaagaacacatcctcctagccaaacaggttggtgtccctaacgtggttgtc 727
Query: 301 ttcctcaacaagcaggaccaggttgatgatgaggagcttctgcaactcgttgaattggag 360
||||| |||||||| ||||||||||| || |||||||| || | ||||| || | |||
Sbjct: 728 ttccttaacaagcaagaccaggttgacgacgaggagctccttgagctcgtggagctcgag 787
Query: 361 gttcgggagcttctatcgtcttacgagttccctggggatgatgttcccattgtttctggt 420
|| ||||||||||| ||||| |||||||| || || ||||| | ||||| |||||
Sbjct: 788 gtccgggagcttctctcgtcctacgagtttcccggtgatgacatccccatcacctctggc 847
Query: 421 tctgcccttttggctcttgaagctctaatggcgaaccctgctatcaaacgtggtgagaat 480
|| ||||| | || || |||||||| ||||| |||||||| ||||| |||||||||||
Sbjct: 848 tccgccctcctcgccctggaagctctcatggccaaccctgccatcaagcgtggtgagaac 907
Query: 481 cagtgggtggataagatttatgagcttatggataatgtggatagctacattcctatccct 540
| ||||| || |||||||| |||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 908 gattgggtcgacaagatttaccagctcatggacaatgttgatagctacatccccatccct 967
Query: 541 cagcgccaaaccgatcttccgtttttgtgtgccattgaagatgtgttttccatcacgggt 600
|||||||| ||||| || || || | ||||||||| |||||||| |||||||| |||
Sbjct: 968 cagcgccagaccgacctccccttcctccttgccattgaggatgtgttctccatcaccggt 1027
Query: 601 cgtggaaccgtggccaccgggcgtattgagagggg 635
||||| ||||| ||||| ||| | |||||||||||
Sbjct: 1028 cgtgggaccgttgccacagggaggattgagagggg 1062
>gnl|LJGI|TC73993 homologue to UniRef100_A7PCR2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 571
Score = 291 bits (147), Expect = 5e-78
Identities = 237/267 (88%)
Strand = Plus / Plus
Query: 865 ttgaagaaggaagaaggtgggaggcactcgcctttctttgctggttacaggccacagttc 924
||||||||||||||||||||||| ||||| ||||| ||||| || |||||||| ||||||
Sbjct: 26 ttgaagaaggaagaaggtgggagacactcacctttttttgcagggtacaggcctcagttc 85
Query: 925 tacatgaggactactgatgtcactggcaaagtcacggccattatgaatgataaggatgag 984
|| ||||| || |||||||| |||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 86 tatatgagaaccactgatgttactggcaaggtcactgccatcatgaacgataaggatgaa 145
Query: 985 gagtccaagatggtgatgcccggagaccgtgttaagatggtggttgagcttattgttcca 1044
||||||||||||||||||||||| ||||| |||||||||||||| || || || || ||
Sbjct: 146 gagtccaagatggtgatgcccggtgaccgggttaagatggtggtggaactcatcgtcccg 205
Query: 1045 gtggcttgtgaacagggaatgaggtttgctattagagaaggaggcaaaactgttggagct 1104
||||| ||||| || |||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 206 gtggcgtgtgagcaaggaatgaggtttgctattagggaaggagggaagactgttggagct 265
Query: 1105 ggtgttatccaatcgatcattgagtga 1131
|||||||||||||| ||||||||||||
Sbjct: 266 ggtgttatccaatctatcattgagtga 292
>gnl|LJGI|TC62204 weakly similar to UniRef100_Q9C7Z9 Cluster: Serine
carboxypeptidase-like 18 precursor; n=1; Arabidopsis
thaliana|Rep: Serine carboxypeptidase-like 18 precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (29%)
Length = 734
Score = 87.7 bits (44), Expect = 1e-16
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 925 tacatgaggactactgatgtcactggcaaagtcacggccattatgaatgataaggatgag 984
||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |
Sbjct: 444 tacatgaggactactgatgtcactggcaaagcaaccagcattatgaatgataagaatggg 503
Query: 985 gagtccaagatggtga 1000
|||||| |||||||||
Sbjct: 504 gagtcccagatggtga 519
>gnl|LJGI|CB829176 homologue to UniRef100_A6ZI76 Cluster: Elongation factor Tu; n=1;
Halimeda lacrimosa|Rep: Elongation factor Tu - Halimeda
lacrimosa, partial (7%)
Length = 536
Score = 81.8 bits (41), Expect = 9e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 204 cgctattcttgttgtctccggcgccgacggccctatgccgcagaccaaagagcacatcct 263
||||||||||||||||||||||||| ||||||||||||| ||||| ||| | ||||||||
Sbjct: 61 cgctattcttgttgtctccggcgccaacggccctatgcctcagacaaaatatcacatcct 2
Query: 264 c 264
|
Sbjct: 1 c 1
>gnl|LJGI|TC78032 UniRef100_Q5UE86 Cluster: Ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit; n=2; Aralia|Rep:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit - Aralia gigantea, partial (42%)
Length = 450
Score = 63.9 bits (32), Expect = 2e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1101 agctggtgttatccaatcgatcattgagtgaa 1132
||||||||||||||||||||||||||||||||
Sbjct: 228 agctggtgttatccaatcgatcattgagtgaa 259