Miyakogusa Predicted Gene

Lj4g3v1415270.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1415270.1 Non Chatacterized Hit- tr|H9MCZ3|H9MCZ3_PINRA
Uncharacterized protein (Fragment) OS=Pinus radiata GN,64.18,6e-19,
,CUFF.49233.1
         (609 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63656 similar to UniRef100_A7PCQ4 Cluster: Chromosome...  1207   0.0  

>gnl|LJGI|TC63656 similar to UniRef100_A7PCQ4 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1019

 Score = 1207 bits (609), Expect = 0.0
 Identities = 609/609 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagcacacagagttatcatcatagcatcacttctcttctgtttagccggaacttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atggcagcacacagagttatcatcatagcatcacttctcttctgtttagccggaacttgt 166

                                                                       
Query: 61  tatgggaaagttctcttctcttccttgaagaaaacccttgatgtcactgcttcccccaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tatgggaaagttctcttctcttccttgaagaaaacccttgatgtcactgcttcccccaaa 226

                                                                       
Query: 121 catggacaagttgtggaagctggattggacactatcactgtgacatgggctctgaacaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 catggacaagttgtggaagctggattggacactatcactgtgacatgggctctgaacaag 286

                                                                       
Query: 181 accttaccagctggaacagattcttcctacaaaaccataaaggtgaagctgtgctacgcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 accttaccagctggaacagattcttcctacaaaaccataaaggtgaagctgtgctacgcg 346

                                                                       
Query: 241 ccgataagtcaacaagaccgcgcgtggagaaagacagaggacgagctctccagggacaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ccgataagtcaacaagaccgcgcgtggagaaagacagaggacgagctctccagggacaag 406

                                                                       
Query: 301 acatgccagcacaagattgtggccaagccctacgatgcatccaacaaaacagtgcacacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 acatgccagcacaagattgtggccaagccctacgatgcatccaacaaaacagtgcacacc 466

                                                                       
Query: 361 ttcgagtggttgattgagagggacgtgcctgaagccacgtacttcgtacgcgcctatgct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttcgagtggttgattgagagggacgtgcctgaagccacgtacttcgtacgcgcctatgct 526

                                                                       
Query: 421 cttgactccaacgacgtgcaagtgggttatggtcaaaccagtgatgctaagaagacaagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cttgactccaacgacgtgcaagtgggttatggtcaaaccagtgatgctaagaagacaagt 586

                                                                       
Query: 481 aacttgttcaagatccaggcaatcaccgggcgacacctgtcgcttgatatatgctctgct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aacttgttcaagatccaggcaatcaccgggcgacacctgtcgcttgatatatgctctgct 646

                                                                       
Query: 541 tgtttcagtgccttctcagtggtgtccctgattttcttcttctatattgagaagagaaag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tgtttcagtgccttctcagtggtgtccctgattttcttcttctatattgagaagagaaag 706

                    
Query: 601 aaacattaa 609
           |||||||||
Sbjct: 707 aaacattaa 715