Miyakogusa Predicted Gene

Lj4g3v1399980.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1399980.1 Non Chatacterized Hit- tr|F6BCV9|F6BCV9_METIK
Putative uncharacterized protein OS=Methanotorris igne,42.31,1.5,
,CUFF.49206.1
         (316 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80413 similar to UniRef100_A7NVT3 Cluster: Chromosome...    62   2e-09
gnl|LJGI|TC59544 similar to UniRef100_A7NVT3 Cluster: Chromosome...    62   2e-09

>gnl|LJGI|TC80413 similar to UniRef100_A7NVT3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (56%)
          Length = 1214

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 101 aaggagaaggaacaaccctaccactgcaatctcaatctc 139
           |||||||||||||||||||||| | ||||||||||||||
Sbjct: 154 aaggagaaggaacaaccctacctccgcaatctcaatctc 192


>gnl|LJGI|TC59544 similar to UniRef100_A7NVT3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 831

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 101 aaggagaaggaacaaccctaccactgcaatctcaatctc 139
           |||||||||||||||||||||| | ||||||||||||||
Sbjct: 194 aaggagaaggaacaaccctacctccgcaatctcaatctc 232