Miyakogusa Predicted Gene

Lj4g3v1389350.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1389350.1 Non Chatacterized Hit- tr|I3S527|I3S527_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,
,CUFF.49170.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82122 similar to UniRef100_A5BHS7 Cluster: Pseudourid...   755   0.0  
gnl|LJGI|TC59070 similar to UniRef100_A7PP59 Cluster: Chromosome...    66   2e-10
gnl|LJGI|TC64266 similar to UniRef100_A7PHZ8 Cluster: Chromosome...    64   7e-10

>gnl|LJGI|TC82122 similar to UniRef100_A5BHS7 Cluster: Pseudouridylate synthase; n=1;
           Vitis vinifera|Rep: Pseudouridylate synthase - Vitis
           vinifera (Grape), partial (13%)
          Length = 641

 Score =  755 bits (381), Expect = 0.0
 Identities = 381/381 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcggctactccatatatctcagcttcagaacaccgccaaaaacctcttccttcgttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  atggcggctactccatatatctcagcttcagaacaccgccaaaaacctcttccttcgttg 142

                                                                       
Query: 61  agcggtggtgttgaagctttcactgttagcaatggaggcacaatgatcttgcctcttccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 agcggtggtgttgaagctttcactgttagcaatggaggcacaatgatcttgcctcttccg 202

                                                                       
Query: 121 ccactgcttcttctgtttcagttgcccgtgatatttctaatggtgataaacaaagaagcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ccactgcttcttctgtttcagttgcccgtgatatttctaatggtgataaacaaagaagcc 262

                                                                       
Query: 181 agaagagaggccatggtcgcattcatgctggtttcccagatctacccagatctgctcaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agaagagaggccatggtcgcattcatgctggtttcccagatctacccagatctgctcaaa 322

                                                                       
Query: 241 aagaggaagaaggagaaaagtagagtagagggtgatggggcagagttcttatggtttggc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aagaggaagaaggagaaaagtagagtagagggtgatggggcagagttcttatggtttggc 382

                                                                       
Query: 301 attcttccaaattccaagcaaacccaaaattaccatggtggctttgttggttcaaattgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attcttccaaattccaagcaaacccaaaattaccatggtggctttgttggttcaaattgg 442

                                
Query: 361 caaggaagctctccctcatga 381
           |||||||||||||||||||||
Sbjct: 443 caaggaagctctccctcatga 463


>gnl|LJGI|TC59070 similar to UniRef100_A7PP59 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 887

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 6   ggctactccatatatctcagcttcagaacaccgccaaaaacctcttccttcgt 58
           |||||||||||| |||||| |||| ||||||||||| ||||||| ||||||||
Sbjct: 315 ggctactccatagatctcaacttcggaacaccgccacaaacctcctccttcgt 367


>gnl|LJGI|TC64266 similar to UniRef100_A7PHZ8 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 762

 Score = 63.9 bits (32), Expect = 7e-10
 Identities = 51/56 (91%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                   
Query: 163 gtgataaacaaagaagccagaagagaggccatggtcgcattca-tgctggtttccc 217
           ||||||||||||||||||| || |||||||||| ||||| ||| ||||||||||||
Sbjct: 358 gtgataaacaaagaagccaaaacagaggccatgatcgcactcagtgctggtttccc 413