Miyakogusa Predicted Gene
- Lj4g3v1389260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1389260.1 tr|G8A2H5|G8A2H5_MEDTR Lysine-specific
demethylase 5B OS=Medicago truncatula GN=MTR_135s0020 PE=4
SV,60.52,0,JmjC,JmjC domain; JmjN,Transcription factor jumonji, JmjN;
zf-C2H2,Zinc finger, C2H2; zf-H2C2_2,NULL,CUFF.49164.1
(4710 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341990 similar to UniRef100_A7PCK1 Cluster: Chromosom... 1285 0.0
gnl|LJGI|TC67217 similar to UniRef100_A7PCK1 Cluster: Chromosome... 811 0.0
gnl|LJGI|GO010329 similar to UniRef100_A7PCK1 Cluster: Chromosom... 145 3e-33
gnl|LJGI|BP064330 homologue to UniRef100_A7PI24 Cluster: Chromos... 70 1e-10
>gnl|LJGI|FS341990 similar to UniRef100_A7PCK1 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 769
Score = 1285 bits (648), Expect = 0.0
Identities = 692/714 (96%)
Strand = Plus / Plus
Query: 1 atggcggcgtgctcgtcggaggaggttttcccgtggctgaaatctctcccggtggcgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atggcggcgtgctcgtcggaggaggttttcccgtggctgaaatctctcccggtggcgccg 115
Query: 61 gagtatcgtccaaccgcggcggagtttcacgatccgatcggctacatcttcaagatagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gagtatcgtccaaccgcggcggagtttcacgatccgatcggctacatcttcaagatagag 175
Query: 121 aaggaagcttccaagtatggaatctgcaaaatcatnnnnnnnnnnnnnnnnnnnnnnaag 180
||||||||||||||||||||||||||||||||||| |||
Sbjct: 176 aaggaagcttccaagtatggaatctgcaaaatcatcccccctgtttccccttcccccaag 235
Query: 181 aaaaccgcaatttccaacctcaaccgctgtcaaccccagttcaccacgcgccagcagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aaaaccgcaatttccaacctcaaccgctgtcaaccccagttcaccacgcgccagcagcag 295
Query: 241 atcgggttctgccctcgccggcaacaaccggttcgccgcccggtttggcacagcggcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atcgggttctgccctcgccggcaacaaccggttcgccgcccggtttggcacagcggcaac 355
Query: 301 cagtactcgttccgtgagttcgagtcaaaggcgaagaccttcgagaagagcttcctcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cagtactcgttccgtgagttcgagtcaaaggcgaagaccttcgagaagagcttcctcaag 415
Query: 361 aaggggaagaagtccacgccgctttcgcctctcgaggttgaaaccctctactggaaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaggggaagaagtccacgccgctttcgcctctcgaggttgaaaccctctactggaaagcc 475
Query: 421 actgtggataaaccgttttctgttgagtatgcgaacgacatgcctgggtctgcgttttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 actgtggataaaccgttttctgttgagtatgcgaacgacatgcctgggtctgcgttttgc 535
Query: 481 cccatgaaggagaatgtttatggcggcggtgacggttatgtcaccgtcggtgagactgcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cccatgaaggagaatgtttatggcggcggtgacggttatgtcaccgtcggtgagactgcg 595
Query: 541 tggaatatgagaggggtttcgagggcgaatgggtcgttgttgaggtttatgaaggaggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tggaatatgagaggggtttcgagggcgaatgggtcgttgttgaggtttatgaaggaggag 655
Query: 601 attcctggtgttacttcgcctatggtgtatctggctatgatgtttagctggtttgcttgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 attcctggtgttacttcgcctatggtgtatctggctatgatgtttagctggtttgcttgg 715
Query: 661 catgttgaggatcatgatttgcatagcttgaattatcttcacatgggtgctcct 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 catgttgaggatcatgatttgcatagcttgaattatcttcacatgggtgctcct 769
>gnl|LJGI|TC67217 similar to UniRef100_A7PCK1 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 833
Score = 811 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Plus
Query: 4302 cacagcagcttcaaaagtttcacgtggcaaggccagagtgaaggatgaggaaggagaata 4361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cacagcagcttcaaaagtttcacgtggcaaggccagagtgaaggatgaggaaggagaata 461
Query: 4362 ccagtgtgacattgaggggtgcaccatgagttttgagactaaacaggaactgacgagtca 4421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ccagtgtgacattgaggggtgcaccatgagttttgagactaaacaggaactgacgagtca 521
Query: 4422 taagagaaatatctgtcctgtgaaagggtgtggaaagaagtttttctcgcacaaatatct 4481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 taagagaaatatctgtcctgtgaaagggtgtggaaagaagtttttctcgcacaaatatct 581
Query: 4482 agtgcagcaccgccgggttcacgaggacgaccgccccctgaagtgcccttggaagggctg 4541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agtgcagcaccgccgggttcacgaggacgaccgccccctgaagtgcccttggaagggctg 641
Query: 4542 caagatgactttcaagtgggcttgggctcgcactgaacatattcgagttcacaccggtgc 4601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 caagatgactttcaagtgggcttgggctcgcactgaacatattcgagttcacaccggtgc 701
Query: 4602 tcgtccttatgtatgtgctgagccgggatgtgcgcagaccttcagattcgtttctgattt 4661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tcgtccttatgtatgtgctgagccgggatgtgcgcagaccttcagattcgtttctgattt 761
Query: 4662 cagtcgtcataagcgaaagactggtcatgtggcaaagagtcgtgaatag 4710
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 cagtcgtcataagcgaaagactggtcatgtggcaaagagtcgtgaatag 810
Score = 664 bits (335), Expect = 0.0
Identities = 335/335 (100%)
Strand = Plus / Plus
Query: 3902 ggaagcaagtgaaatgcatggatgaagactatgtaagttcagatgatcaaatggaggagg 3961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaagcaagtgaaatgcatggatgaagactatgtaagttcagatgatcaaatggaggagg 61
Query: 3962 attctcatcagcaacacaggagaactcttcgaagtaagcaatctaaatcacagactcttc 4021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 attctcatcagcaacacaggagaactcttcgaagtaagcaatctaaatcacagactcttc 121
Query: 4022 aacaaatgaaacaagcgaatccccgtgcgacaaggaagacatccaggcctgtgaagcgag 4081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aacaaatgaaacaagcgaatccccgtgcgacaaggaagacatccaggcctgtgaagcgag 181
Query: 4082 gtgcccttgtgctaatgaaatcaaaggctcctcgaaaaacgaagcagcagcctcgtgtgt 4141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtgcccttgtgctaatgaaatcaaaggctcctcgaaaaacgaagcagcagcctcgtgtgt 241
Query: 4142 tgaatagtcaatctggtacatccagagatgaggattcacaaatagaacaggaggaagaag 4201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgaatagtcaatctggtacatccagagatgaggattcacaaatagaacaggaggaagaag 301
Query: 4202 gtggtcctagcacacgccttcggaagagagtccct 4236
|||||||||||||||||||||||||||||||||||
Sbjct: 302 gtggtcctagcacacgccttcggaagagagtccct 336
>gnl|LJGI|GO010329 similar to UniRef100_A7PCK1 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 684
Score = 145 bits (73), Expect = 3e-33
Identities = 137/157 (87%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 4346 atgaggaaggagaataccagtgtgacattgaggggtgcaccatgagttttgagactaaac 4405
||||||||| ||||| ||||||||||||||||||||||||||||| ||||| | | ||||
Sbjct: 513 atgaggaagcagaattccagtgtgacattgaggggtgcaccatgacttttgggtcaaaac 572
Query: 4406 aggaactgacgagtcataagagaaatatctgtcctgtgaaagggtgtggaaagaagtttt 4465
|||| |||||| ||| |||| ||||||||||||||||||| | |||| ||||||||||
Sbjct: 573 aggagctgacgcatcacaagaaaaatatctgtcctgtgaaa-gttgtgcgaagaagtttt 631
Query: 4466 tctcgcacaaatatctagtgcagcaccgccgggttca 4502
|||| ||||| ||||| ||||||||||| || |||||
Sbjct: 632 tctcacacaagtatctggtgcagcaccgtcgagttca 668
Score = 75.8 bits (38), Expect = 2e-12
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3939 ttcagatgatcaaatggaggaggattctcatcagcaacacaggagaactcttcgaagtaa 3998
|||||||||| ||||||| || |||||||||||||| || | |||||||||||||| |||
Sbjct: 103 ttcagatgatgaaatggaagatgattctcatcagcagcagaagagaactcttcgaactaa 162
Query: 3999 gcaatctaaa 4008
|||||||||
Sbjct: 163 acaatctaaa 172
Score = 60.0 bits (30), Expect = 1e-07
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 4190 aggaggaagaaggtggtcctagcacacgccttcggaagagag 4231
|||||||||||||||| |||||||||||||| |||||||||
Sbjct: 360 aggaggaagaaggtggacctagcacacgcctgaggaagagag 401
>gnl|LJGI|BP064330 homologue to UniRef100_A7PI24 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 475
Score = 69.9 bits (35), Expect = 1e-10
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 641 tgtttagctggtttgcttggcatgttgaggatcatgatttgcatagcttgaattatcttc 700
||||||| |||||||| |||||||||||||||||||| | || |||||||||| |||||
Sbjct: 64 tgtttagttggtttgcctggcatgttgaggatcatgagcttcacagcttgaattttcttc 123
Query: 701 aca 703
|||
Sbjct: 124 aca 126
Score = 63.9 bits (32), Expect = 9e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 899 ctggtgaatttgttgtgacattcccaagagcctatcacacaggatttagtcatggtttta 958
||||||||||||||||||| || |||||||| ||||| |||||| || ||||||||||
Sbjct: 322 ctggtgaatttgttgtgacttttccaagagcttatcatgtaggattcagccatggtttta 381
Query: 959 actg 962
||||
Sbjct: 382 actg 385