Miyakogusa Predicted Gene
- Lj4g3v1389250.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1389250.2 Non Chatacterized Hit- tr|D8TDW9|D8TDW9_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,48.86,2e-16,zinc finger,Zinc finger, CCCH-type; no
description,NULL; CCCH zinc finger,NULL; zf-CCCH,Zinc
finger,,CUFF.49162.2
(1545 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV409227 similar to UniRef100_A7PCK0 Cluster: Chromosom... 846 0.0
gnl|LJGI|TC73218 similar to UniRef100_A7PCK0 Cluster: Chromosome... 622 e-177
gnl|LJGI|AV407697 similar to UniRef100_A9V3R0 Cluster: Predicted... 573 e-162
gnl|LJGI|TC63372 64 3e-09
gnl|LJGI|TC75432 homologue to UniRef100_A6Y950 Cluster: Vacuolar... 62 1e-08
>gnl|LJGI|AV409227 similar to UniRef100_A7PCK0 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 427
Score = 846 bits (427), Expect = 0.0
Identities = 427/427 (100%)
Strand = Plus / Plus
Query: 718 tgtaagtttggaaaagcttgcaagtataaccacacaagaggaagcagttcaacagcacca 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtaagtttggaaaagcttgcaagtataaccacacaagaggaagcagttcaacagcacca 60
Query: 778 aaacttaactttatcggcctacctattcgtctgggagagagagagtgccccttttacatg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacttaactttatcggcctacctattcgtctgggagagagagagtgccccttttacatg 120
Query: 838 cgcactggctcttgtaagtatggagcaaactgcaggtttaatcatcctgatcctacaagt 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcactggctcttgtaagtatggagcaaactgcaggtttaatcatcctgatcctacaagt 180
Query: 898 gttggaggatctgatcctcccccagggtatggtaatgtggggtcatttaaaggtgcatca 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttggaggatctgatcctcccccagggtatggtaatgtggggtcatttaaaggtgcatca 240
Query: 958 ccttctgtaccctcgtggtcttcttcaaaaacattaaatgagacttcttttatgccgatg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccttctgtaccctcgtggtcttcttcaaaaacattaaatgagacttcttttatgccgatg 300
Query: 1018 atccttaagccaagtcaaggagtttctccccaaaattctgactggaatggatatcaggca 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atccttaagccaagtcaaggagtttctccccaaaattctgactggaatggatatcaggca 360
Query: 1078 cctgtctacctatctgagaggagtatgcatccaacttctgcatatgtcatgaacccagca 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctgtctacctatctgagaggagtatgcatccaacttctgcatatgtcatgaacccagca 420
Query: 1138 attgaaa 1144
|||||||
Sbjct: 421 attgaaa 427
>gnl|LJGI|TC73218 similar to UniRef100_A7PCK0 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 605
Score = 622 bits (314), Expect = e-177
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 1232 aaactggggcttgcaaatttaaatctaattgtaaatttcaccatccaaggaatcgagttg 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaactggggcttgcaaatttaaatctaattgtaaatttcaccatccaaggaatcgagttg 60
Query: 1292 caagattacctccatgcatcctcagtgacaagggcctgcctctgagacctgaccagaatg 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagattacctccatgcatcctcagtgacaagggcctgcctctgagacctgaccagaatg 120
Query: 1352 tctgctcgcattacagtcgttatggaatttgcaaatttggaccagcttgtaggtatgacc 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgctcgcattacagtcgttatggaatttgcaaatttggaccagcttgtaggtatgacc 180
Query: 1412 acccaatagacccactgcccgtgatgatgcctggactcggcctgcaatcctacccaaact 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acccaatagacccactgcccgtgatgatgcctggactcggcctgcaatcctacccaaact 240
Query: 1472 cagctgatgttgagatggctgggttgggtggaagtgcaggtgcaagtgatgtgagaattc 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagctgatgttgagatggctgggttgggtggaagtgcaggtgcaagtgatgtgagaattc 300
Query: 1532 agcaatctgtgtaa 1545
||||||||||||||
Sbjct: 301 agcaatctgtgtaa 314
>gnl|LJGI|AV407697 similar to UniRef100_A9V3R0 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (4%)
Length = 395
Score = 573 bits (289), Expect = e-162
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 74 tgggttctgaaccttcttctcccgttgctcatcctccaccgccgtcagatctcaatcacg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tgggttctgaaccttcttctcccgttgctcatcctccaccgccgtcagatctcaatcacg 166
Query: 134 ccgcggaggaggatgatgatgacgcacttggtggagagtttcagaacaagctggatttga 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ccgcggaggaggatgatgatgacgcacttggtggagagtttcagaacaagctggatttga 226
Query: 194 agggtgaggatgatgggggtgctgaaactggtgagaaagcttccgatgatggaggggttt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agggtgaggatgatgggggtgctgaaactggtgagaaagcttccgatgatggaggggttt 286
Query: 254 gtgatgcggaatctgttaagggtggtgaagggtttgatggagatagcaggggttgggata 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gtgatgcggaatctgttaagggtggtgaagggtttgatggagatagcaggggttgggata 346
Query: 314 acagtagttggggtgagaatgtgattgaagaggtgggtagagaggctta 362
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acagtagttggggtgagaatgtgattgaagaggtgggtagagaggctta 395
Score = 91.7 bits (46), Expect = 1e-17
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 1 atggaaccttctgagtctgattcacctgctgcagttaccaatggcg 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atggaaccttctgagtctgattcacctgctgcagttaccaatggcg 79
>gnl|LJGI|TC63372
Length = 728
Score = 63.9 bits (32), Expect = 3e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 156 cgcacttggtggagagtttcagaacaagctggatttgaagggtgaggatgatgggg 211
|||||||||||||||| ||| ||||||| ||||||| ||||||| |||||| ||||
Sbjct: 506 cgcacttggtggagagcttcggaacaagttggatttcaagggtgcggatgaagggg 561
>gnl|LJGI|TC75432 homologue to UniRef100_A6Y950 Cluster: Vacuolar H+-ATPase B
subunit; n=1; Medicago truncatula|Rep: Vacuolar
H+-ATPase B subunit - Medicago truncatula (Barrel
medic), partial (45%)
Length = 790
Score = 61.9 bits (31), Expect = 1e-08
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 435 gagagattttgatgttgatgttgatgttgatgttg 469
||||||| |||||||||||||||||||||||||||
Sbjct: 77 gagagatgttgatgttgatgttgatgttgatgttg 43
Score = 56.0 bits (28), Expect = 7e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 445 gatgttgatgttgatgttgatgttgatg 472
||||||||||||||||||||||||||||
Sbjct: 73 gatgttgatgttgatgttgatgttgatg 46