Miyakogusa Predicted Gene

Lj4g3v1389210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1389210.1 Non Chatacterized Hit- tr|I3SIL6|I3SIL6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.21,0,ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN,NULL; FAMILY NOT
NAMED,NULL; ZF_RING_2,Zinc fing,CUFF.49160.1
         (768 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82524 similar to UniRef100_A7QBV4 Cluster: Chromosome...    80   2e-14

>gnl|LJGI|TC82524 similar to UniRef100_A7QBV4 Cluster: Chromosome chr1 scaffold_75,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_75, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (52%)
          Length = 786

 Score = 79.8 bits (40), Expect = 2e-14
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                       
Query: 460 agagaaaatgagtgtggtatctgcttagagtcttgcacaaaaatggtcttacctaattgc 519
           |||||| |||| ||||| || ||||||||| ||||||| |||||||| || |||||||||
Sbjct: 171 agagaagatgaatgtgggatatgcttagagccttgcaccaaaatggttttgcctaattgc 230

                           
Query: 520 tgccatgctatgtgta 535
           || |||||||||||||
Sbjct: 231 tgtcatgctatgtgta 246