Miyakogusa Predicted Gene

Lj4g3v1388620.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1388620.1 Non Chatacterized Hit- tr|I1MUN6|I1MUN6_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,67.92,0.0000000000004,
,NODE_63295_length_113_cov_183.761063.path2.1
         (159 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58939 similar to UniRef100_A7PHE8 Cluster: Chromosome...   315   4e-86
gnl|LJGI|TC57656 homologue to UniRef100_A7PHE8 Cluster: Chromoso...   276   4e-74

>gnl|LJGI|TC58939 similar to UniRef100_A7PHE8 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (93%)
          Length = 1898

 Score =  315 bits (159), Expect = 4e-86
 Identities = 159/159 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacagttgaaagcactccctgcatatccatcctctgctactcctccttccctgcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atggcacagttgaaagcactccctgcatatccatcctctgctactcctccttccctgcat 120

                                                                       
Query: 61  gcaacagatcaccttctgcatcatcagttctggaaggcaaagccatcatcattcaaacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaacagatcaccttctgcatcatcagttctggaaggcaaagccatcatcattcaaacag 180

                                                  
Query: 121 ttgggaccaagagcttgtgttggtgctggtaaacttcaa 159
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgggaccaagagcttgtgttggtgctggtaaacttcaa 219


>gnl|LJGI|TC57656 homologue to UniRef100_A7PHE8 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (30%)
          Length = 842

 Score =  276 bits (139), Expect = 4e-74
 Identities = 154/159 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacagttgaaagcactccctgcatatccatcctctgctactcctccttccctgcat 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atggcgcagttgaaagcactccctgcatatccatcctctgctactcctccttccctgcat 282

                                                                       
Query: 61  gcaacagatcaccttctgcatcatcagttctggaaggcaaagccatcatcattcaaacag 120
            |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 283 tcaacagttcaccttctgcatcatcagttttggaaggcaaagccatcatcattcaaacag 342

                                                  
Query: 121 ttgggaccaagagcttgtgttggtgctggtaaacttcaa 159
           || ||||||||||||||||||||||||||||||||||||
Sbjct: 343 tttggaccaagagcttgtgttggtgctggtaaacttcaa 381