Miyakogusa Predicted Gene
- Lj4g3v1388330.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1388330.2 Non Chatacterized Hit- tr|I1MUP1|I1MUP1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23181
PE,88.74,0,CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2,COG complex
component, COG2; COG2,Conserved oligomeri,CUFF.49115.2
(2268 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69136 similar to UniRef100_Q9ASS9 Cluster: AT4g24840/... 920 0.0
gnl|LJGI|BP047513 similar to UniRef100_A7PHF8 Cluster: Chromosom... 799 0.0
gnl|LJGI|AV420667 weakly similar to UniRef100_A7PHF8 Cluster: Ch... 708 0.0
gnl|LJGI|DC597868 similar to UniRef100_Q9ASS9 Cluster: AT4g24840... 591 e-168
gnl|LJGI|TC79557 similar to UniRef100_A7PHF8 Cluster: Chromosome... 391 e-107
gnl|LJGI|BP065721 similar to UniRef100_A7PHF8 Cluster: Chromosom... 238 1e-61
>gnl|LJGI|TC69136 similar to UniRef100_Q9ASS9 Cluster: AT4g24840/F6I7_50; n=1;
Arabidopsis thaliana|Rep: AT4g24840/F6I7_50 -
Arabidopsis thaliana (Mouse-ear cress), partial (19%)
Length = 590
Score = 920 bits (464), Expect = 0.0
Identities = 464/464 (100%)
Strand = Plus / Plus
Query: 1 atggcggatccgatcccggcgccgcacagatccgccacggacttcttctccgatccactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggcggatccgatcccggcgccgcacagatccgccacggacttcttctccgatccactc 186
Query: 61 gacgctcacccgctgtggttcaaaccggcgtcgttcctctctccggacttcgattccgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gacgctcacccgctgtggttcaaaccggcgtcgttcctctctccggacttcgattccgaa 246
Query: 121 tcctacatttcggaactccgaaccttcgtccccttcgacactctccgttcggaactcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcctacatttcggaactccgaaccttcgtccccttcgacactctccgttcggaactcaac 306
Query: 181 aactacctctcctccctcaaccacgaactcatcgatctcatcaaccgcgactacgccgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aactacctctcctccctcaaccacgaactcatcgatctcatcaaccgcgactacgccgat 366
Query: 241 ttcgtcaacctcagcaccaagctcgtcgacgtcgacgccgccgtcgtgcggatgcgcgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttcgtcaacctcagcaccaagctcgtcgacgtcgacgccgccgtcgtgcggatgcgcgcc 426
Query: 301 ccgcttgtggaactcagagagaagatcgagcagttcagaggatctgttgaagtttcgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccgcttgtggaactcagagagaagatcgagcagttcagaggatctgttgaagtttcgctt 486
Query: 361 gtcgccattgagaatggtttgaagcaaaggtctgaagctgcctccgcgagagagactctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtcgccattgagaatggtttgaagcaaaggtctgaagctgcctccgcgagagagactctg 546
Query: 421 gagcttctccttgatacatttcacgtcgtttcgaaggttgagaa 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gagcttctccttgatacatttcacgtcgtttcgaaggttgagaa 590
>gnl|LJGI|BP047513 similar to UniRef100_A7PHF8 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 422
Score = 799 bits (403), Expect = 0.0
Identities = 406/407 (99%)
Strand = Plus / Plus
Query: 1034 ccaattcaatccttaaagaggttctctatgctattcaaaaggggaaaccaggtgcatttt 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaattcaatccttaaagaggttctctatgctattcaaaaggggaaaccaggtgcatttt 60
Query: 1094 ctcctggaagaccaacagagttcttgaaaaattacaaatcaagcttagagttcttggctt 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcctggaagaccaacagagttcttgaaaaattacaaatcaagcttagagttcttggctt 120
Query: 1154 atctagaagaccactgtccatccagatctgccgttgcaaaatttcgatctgaagcaatat 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctagaagaccactgtccatccagatctgccgttgcaaaatttcgatctgaagcaatat 180
Query: 1214 atactgagttcatgaaacaatggaatatcggagtgtatttctctctgaggtttcaagaaa 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atactgagttcatgaaacaatggaatatcggagtgtatttctctctgaggtttcaagaaa 240
Query: 1274 tagcagggtctctagattctgtgctcacatcatccagtcttgtccctgttcaaaatttag 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagcagggtctctagattctgtgctcacatcatccagtcttgtccctgttcaaaatttag 300
Query: 1334 accctggcgaatcaaataatcaatatttaacattgactcaaagtgtcactctgttggaga 1393
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 accctggcgaatcaaataatcaatatttaacattgactcaaagtgtcactctgtcggaga 360
Query: 1394 gtttgaaatcttgctggagagaagatgttcttgtcctttcttgttct 1440
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtttgaaatcttgctggagagaagatgttcttgtcctttcttgttct 407
>gnl|LJGI|AV420667 weakly similar to UniRef100_A7PHF8 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 378
Score = 708 bits (357), Expect = 0.0
Identities = 371/378 (98%)
Strand = Plus / Plus
Query: 1631 attacctacagcatgtgcttcagctcttatcttcatgctcccctgatgttcttgaatcag 1690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attacctacagcatgtgcttcagctcttatcttcatgctcccctgatgttcttgaatcag 60
Query: 1691 taaggcagagcattttacagggtgcacaatcattgaaatccatagaacctttagtcatca 1750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaggcagagcattttacagggtgcacaatcattgaaatccatagaacctttagtcatca 120
Query: 1751 aagcagtggtggagtcactggtggaaaaatcagttgaggacttgagacagatgaagggga 1810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagcagtggtggagtcactggtggaaaaatcagttgaggacttgagacagatgaagggga 180
Query: 1811 taacagcaacttacagactgactaataaacaacctatcaagcattcacaatatgtttctg 1870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taacagcaacttacagactgactaataaacaacctatcaagcattcacaatatgtttctg 240
Query: 1871 gggtattacgcccccttaaggnnnnnnnggatggggagagaaccatgagatatttagcaa 1930
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 gggtattacgcccccttaaggtttttttggatggggagagaaccatgagatatttagcaa 300
Query: 1931 gcgaaacaaagaatgaaatactcctttgtgctgcaactgagattactgaccgatattatg 1990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgaaacaaagaatgaaatactcctttgtgctgcaactgagattactgaccgatattatg 360
Query: 1991 aattagcagctgaccttg 2008
||||||||||||||||||
Sbjct: 361 aattagcagctgaccttg 378
>gnl|LJGI|DC597868 similar to UniRef100_Q9ASS9 Cluster: AT4g24840/F6I7_50; n=1;
Arabidopsis thaliana|Rep: AT4g24840/F6I7_50 -
Arabidopsis thaliana (Mouse-ear cress), partial (13%)
Length = 421
Score = 591 bits (298), Expect = e-168
Identities = 310/314 (98%)
Strand = Plus / Plus
Query: 1 atggcggatccgatcccggcgccgcacagatccgccacggacttcttctccgatccactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atggcggatccgatcccggcgccgcacagatccgccacggacttcttctccgatccactc 167
Query: 61 gacgctcacccgctgtggttcaaaccggcgtcgttcctctctccggacttcgattccgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gacgctcacccgctgtggttcaaaccggcgtcgttcctctctccggacttcgattccgaa 227
Query: 121 tcctacatttcggaactccgaaccttcgtccccttcgacactctccgttcggaactcaac 180
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 228 tcctacatttcggaactccgaaccttcgtccccttcgacactctgggggcggaactcaac 287
Query: 181 aactacctctcctccctcaaccacgaactcatcgatctcatcaaccgcgactacgccgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aactacctctcctccctcaaccacgaactcatcgatctcatcaaccgcgactacgccgat 347
Query: 241 ttcgtcaacctcagcaccaagctcgtcgacgtcgacgccgccgtcgtgcggatgcgcgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttcgtcaacctcagcaccaagctcgtcgacgtcgacgccgccgtcgtgcggatgcgcgcc 407
Query: 301 ccgcttgtggaact 314
||||||||||||||
Sbjct: 408 ccgcttgtggaact 421
>gnl|LJGI|TC79557 similar to UniRef100_A7PHF8 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 662
Score = 391 bits (197), Expect = e-107
Identities = 197/197 (100%)
Strand = Plus / Plus
Query: 2072 ctggagcaagttcagatatctcagataattatgtgtctgacactgacaaaatttgtatgc 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggagcaagttcagatatctcagataattatgtgtctgacactgacaaaatttgtatgc 60
Query: 2132 agttattccttgatattcaggagtacggccgtaacctctctgcgctaggggttgaagcag 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttattccttgatattcaggagtacggccgtaacctctctgcgctaggggttgaagcag 120
Query: 2192 tcaatattgcatcctactgttcattatggcagtgtgtggctcctgtggataagaaaaact 2251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaatattgcatcctactgttcattatggcagtgtgtggctcctgtggataagaaaaact 180
Query: 2252 caattaacctctaagag 2268
|||||||||||||||||
Sbjct: 181 caattaacctctaagag 197
>gnl|LJGI|BP065721 similar to UniRef100_A7PHF8 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 499
Score = 238 bits (120), Expect = 1e-61
Identities = 120/120 (100%)
Strand = Plus / Minus
Query: 2149 caggagtacggccgtaacctctctgcgctaggggttgaagcagtcaatattgcatcctac 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caggagtacggccgtaacctctctgcgctaggggttgaagcagtcaatattgcatcctac 303
Query: 2209 tgttcattatggcagtgtgtggctcctgtggataagaaaaactcaattaacctctaagag 2268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgttcattatggcagtgtgtggctcctgtggataagaaaaactcaattaacctctaagag 243
Score = 168 bits (85), Expect = 1e-40
Identities = 87/88 (98%)
Strand = Plus / Minus
Query: 2064 aagacgagctggagcaagttcagatatctcagataattatgtgtctgacactgacaaaat 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 499 aagacgagctggagcaagttcagatatctcagataattatgtgtctgacactgacnaaat 440
Query: 2124 ttgtatgcagttattccttgatattcag 2151
||||||||||||||||||||||||||||
Sbjct: 439 ttgtatgcagttattccttgatattcag 412