Miyakogusa Predicted Gene
- Lj4g3v1388320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1388320.1 tr|G7JLF1|G7JLF1_MEDTR Chromatin remodeling
complex subunit OS=Medicago truncatula GN=MTR_4g103600 P,70.1,0,SWI
complex, BAF60b domains,SWIB domain; coiled-coil,NULL; SWIB,SWIB/MDM2
domain; SUBFAMILY NOT NAME,CUFF.49113.1
(1617 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82114 similar to UniRef100_A7PHG4 Cluster: Chromosome... 823 0.0
gnl|LJGI|TC57895 weakly similar to UniRef100_A7PHG4 Cluster: Chr... 797 0.0
gnl|LJGI|FS355168 similar to UniRef100_A7PHG4 Cluster: Chromosom... 119 6e-26
>gnl|LJGI|TC82114 similar to UniRef100_A7PHG4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 849
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 1203 cctggagcataaactcaagttttctggaacttgtcccgtcggaactgcatgttacgatat 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggagcataaactcaagttttctggaacttgtcccgtcggaactgcatgttacgatat 60
Query: 1263 acaggttgatgtacctcttccactagagaaagatatgtctgcattcttgacaagcattga 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaggttgatgtacctcttccactagagaaagatatgtctgcattcttgacaagcattga 120
Query: 1323 gagtcacaaagagattgataattttgatgaagtgatttgttcttccataaagaagatcca 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagtcacaaagagattgataattttgatgaagtgatttgttcttccataaagaagatcca 180
Query: 1383 agggcatcttaggaggcgggcattctttcttggctttagtcagtcacctgcagagtttat 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agggcatcttaggaggcgggcattctttcttggctttagtcagtcacctgcagagtttat 240
Query: 1443 aaattctttgatcacctctcagagcaaggatctaaaggttgttgctggtgatgccagcca 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaattctttgatcacctctcagagcaaggatctaaaggttgttgctggtgatgccagcca 300
Query: 1503 tagtgctgataatgaacgacgttctgaattctacaaccaatcttgggttgaggatgctat 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtgctgataatgaacgacgttctgaattctacaaccaatcttgggttgaggatgctat 360
Query: 1563 cattcgctacctgagccggaaaactgctcggagtgatgctcctggaaacatctga 1617
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cattcgctacctgagccggaaaactgctcggagtgatgctcctggaaacatctga 415
>gnl|LJGI|TC57895 weakly similar to UniRef100_A7PHG4 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 827
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Plus
Query: 269 ctgttggtctattgcataacagtggcaacacccatgtgggcactgctgctcctggaactg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctgttggtctattgcataacagtggcaacacccatgtgggcactgctgctcctggaactg 485
Query: 329 cgagtgcgaagcgcgcgaatcagaagccgccttctcgcgggcctcaaggttcacccagtg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cgagtgcgaagcgcgcgaatcagaagccgccttctcgcgggcctcaaggttcacccagtg 545
Query: 389 ctaaccaatcgtcggcatttaagaccatggagttgactccggctcctctgaggaggaaga 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctaaccaatcgtcggcatttaagaccatggagttgactccggctcctctgaggaggaaga 605
Query: 449 gaagctacccggagaagcaaattccggaaagggtggctaagcttgtgcctgagtgtgctg 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaagctacccggagaagcaaattccggaaagggtggctaagcttgtgcctgagtgtgctg 665
Query: 509 tttatacgaggttgcgtgagctcgaggcgcagatagatgctgctttgtttaggaaaaaga 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tttatacgaggttgcgtgagctcgaggcgcagatagatgctgctttgtttaggaaaaaga 725
Query: 569 ttgatgtgcaggaggctgttagaaaccctacctgtgttcagaaaactatgcgtgtttatg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ttgatgtgcaggaggctgttagaaaccctacctgtgttcagaaaactatgcgtgtttatg 785
Query: 629 tgtataataccttttcaaatcagaataaaatggattccggga 670
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgtataataccttttcaaatcagaataaaatggattccggga 827
Score = 367 bits (185), Expect = e-100
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1 atgaacaacaacaatccagccaagaatccagtgacgccgtcgtttcagcttctcacccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atgaacaacaacaatccagccaagaatccagtgacgccgtcgtttcagcttctcacccag 217
Query: 61 tctcagcctcaaatccaaggtgctgttcagttccctggccactttcagctttcacaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tctcagcctcaaatccaaggtgctgttcagttccctggccactttcagctttcacaaccc 277
Query: 121 caaacccatttgattgcacaacaagcacaatatgcacaacctcgtcttcaccctcaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 caaacccatttgattgcacaacaagcacaatatgcacaacctcgtcttcaccctcaaatg 337
Query: 181 ccgcc 185
|||||
Sbjct: 338 ccgcc 342
>gnl|LJGI|FS355168 similar to UniRef100_A7PHG4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 676
Score = 119 bits (60), Expect = 6e-26
Identities = 330/420 (78%)
Strand = Plus / Minus
Query: 1188 accacagcctatacacctggagcataaactcaagttttctggaacttgtcccgtcggaac 1247
||||||||| ||||| |||||||||| ||||| |||||||| |||||| | |||||
Sbjct: 672 accacagcccatacagttggagcataacatcaagctttctggatattgtccaggtggaac 613
Query: 1248 tgcatgttacgatatacaggttgatgtacctcttccactagagaaagatatgtctgcatt 1307
| ||||||||||| | | ||| || || ||| ||||||| ||||| || |||| |||||
Sbjct: 612 tacatgttacgatgtgctggtcgacgtgccttttccactggagaatgaagtgtccgcatt 553
Query: 1308 cttgacaagcattgagagtcacaaagagattgataattttgatgaagtgatttgttcttc 1367
||| | |||| |||||||| |||||||| || ||| ||||| ||||||||| ||||
Sbjct: 552 tttggctagcactgagagtccaaaagagatggaagctttagatgaggtgatttgtgcttc 493
Query: 1368 cataaagaagatccaagggcatcttaggaggcgggcattctttcttggctttagtcagtc 1427
| ||||||||||||| | |||| ||||| ||||| | ||||||| ||||||||||||
Sbjct: 492 cttaaagaagatccaggaacatcgaaggagacgggcttcctttcttaactttagtcagtc 433
Query: 1428 acctgcagagtttataaattctttgatcacctctcagagcaaggatctaaaggttgttgc 1487
|| || |||| | | || ||| ||| | ||||||||||| | |||||| |||| ||
Sbjct: 432 tccagctgagtatgttaacacttcgattgcttctcagagcaaagctctaaaacttgtagc 373
Query: 1488 tggtgatgccagccatagtgctgataatgaacgacgttctgaattctacaaccaatcttg 1547
| | ||||||||| || ||||| || |||| || |||||||||||||| || | ||
Sbjct: 372 tagagatgccagctgtaatgctgtaaaggaacagcggtctgaattctacaataaaccatg 313
Query: 1548 ggttgaggatgctatcattcgctacctgagccggaaaactgctcggagtgatgctcctgg 1607
|||||||||||| |||||| ||| ||| ||| ||||||||| | |||||| |||||||
Sbjct: 312 ggttgaggatgccgccattcggtacttgaaccgcaaaactgctggaagtgatactcctgg 253