Miyakogusa Predicted Gene

Lj4g3v1376890.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1376890.1 CUFF.49094.1
         (1008 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70475 similar to UniRef100_A9RE82 Cluster: Predicted ...   930   0.0  
gnl|LJGI|TC82239 homologue to UniRef100_O65738 Cluster: Replicat...   759   0.0  

>gnl|LJGI|TC70475 similar to UniRef100_A9RE82 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (44%)
          Length = 555

 Score =  930 bits (469), Expect = 0.0
 Identities = 478/481 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcatcctcatcgtcaaccaccaccaacaccaccgtcggctacgacgtcccatgggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  atggcatcctcatcgtcaaccaccaccaacaccaccgtcggctacgacgtcccatgggtg 134

                                                                       
Query: 61  gagaagtaccgaccctccaaggtcgccgacatcgtcggcaaccaagacgccgtctctcgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gagaagtaccgaccctccaaggtcgccgacatcgtcggcaaccaagacgccgtctctcgc 194

                                                                       
Query: 121 ctccaagtcatcgctcgcgacggcaacatgcccaacctcattctctccggtcctcccggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ctccaagtcatcgctcgcgacggcaacatgcccaacctcattctctccggtcctcccggc 254

                                                                       
Query: 181 accggcaaaaccaccagcattctcgccctcgcgcatgagcttctcggtcccaattgcaaa 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 255 accggcaaaaccaccagcattctcgccctcgcacatgagcttctcggtcccaattgcaaa 314

                                                                       
Query: 241 gaagcagttcttgaactcaatgcatcagatgatagaggaatagatgttgtgaggaacaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaagcagttcttgaactcaatgcatcagatgatagaggaatagatgttgtgaggaacaag 374

                                                                       
Query: 301 atcaagatgtttgctcaaaagaaagtaacgctgccgccgggccgacacaagatagttata 360
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 375 atcaagatgtttgctcaaaagaaagtaacgctgcctccgggccgacacaagatagttata 434

                                                                       
Query: 361 ctggatgaagctgacagcatgacaaccggagcacagcaagccttgagaaggacaattgag 420
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 435 ctggatgaagctgacagcatgacaaccggagcacagcaagccttgagaagaacaattgag 494

                                                                       
Query: 421 atatattccaatactactcgtttcgctcttgcttgtaacacatcggctaagattattgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atatattccaatactactcgtttcgctcttgcttgtaacacatcggctaagattattgag 554

            
Query: 481 c 481
           |
Sbjct: 555 c 555


>gnl|LJGI|TC82239 homologue to UniRef100_O65738 Cluster: Replication factor C/activator
            1 subunit; n=1; Cicer arietinum|Rep: Replication factor
            C/activator 1 subunit - Cicer arietinum (Chickpea)
            (Garbanzo), partial (76%)
          Length = 648

 Score =  759 bits (383), Expect = 0.0
 Identities = 383/383 (100%)
 Strand = Plus / Plus

                                                                        
Query: 626  atatgaggcaggcattgaataacttgcaagcaacatacagcgggttccagtttgtcaacc 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atatgaggcaggcattgaataacttgcaagcaacatacagcgggttccagtttgtcaacc 60

                                                                        
Query: 686  aagcaaatgtttttaaggtttgtgatcagccgcatccactgcatgtgaagaatatggtgc 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aagcaaatgtttttaaggtttgtgatcagccgcatccactgcatgtgaagaatatggtgc 120

                                                                        
Query: 746  gcaatgtgattgaagggaattttgatgaggcttgtacggggctcaaacaactgtatgact 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcaatgtgattgaagggaattttgatgaggcttgtacggggctcaaacaactgtatgact 180

                                                                        
Query: 806  taggatattctcccacagatatcatcaccacactctttcgtataataaagaattatgata 865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  taggatattctcccacagatatcatcaccacactctttcgtataataaagaattatgata 240

                                                                        
Query: 866  tggcagagtacatgaaactagaattcatgaaggaaactggatttgctcatatgagaatat 925
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tggcagagtacatgaaactagaattcatgaaggaaactggatttgctcatatgagaatat 300

                                                                        
Query: 926  gtgatggagttggttcttatcttcagctgtgtggcctattggctaagctttttctagttc 985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gtgatggagttggttcttatcttcagctgtgtggcctattggctaagctttttctagttc 360

                                   
Query: 986  gtgaaactgctaaagctgcatga 1008
            |||||||||||||||||||||||
Sbjct: 361  gtgaaactgctaaagctgcatga 383