Miyakogusa Predicted Gene

Lj4g3v1345770.1
Show Alignment: 
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1345770.1 tr|G7IAZ6|G7IAZ6_MEDTR Survival of motor neuron
protein-interacting protein OS=Medicago truncatula
G,41.71,2e-18,seg,NULL;
coiled-coil,NULL,NODE_82077_length_658_cov_37.095745.path1.1
         (609 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV767772 similar to UniRef100_Q7RFI2 Cluster: Drosophil...    74   1e-12

>gnl|LJGI|AV767772 similar to UniRef100_Q7RFI2 Cluster: Drosophila melanogaster
           BcDNA.GH02833; n=1; Plasmodium yoelii yoelii|Rep:
           Drosophila, partial (1%)
          Length = 460

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 123/153 (80%), Gaps = 9/153 (5%)
 Strand = Plus / Plus

                                                                       
Query: 23  atgcttcagttctcgccggcgactgcttcaccaactcacaagaacacctcgttcttgctg 82
           ||||||| ||||||||||| ||||| |||| |||||||||||||||||| ||| ||||| 
Sbjct: 106 atgcttccgttctcgccggggactggttcatcaactcacaagaacaccttgtttttgctc 165

                                                                       
Query: 83  ctgctgc---------tgcggaggaggaactgctccaagttaagaagaaacaactcctcg 133
            ||||||            || ||||||||||||| |||  || || |||||||||||||
Sbjct: 166 atgctgcaaacgacaacaggggggaggaactgctcaaagggaaaaaaaaacaactcctcg 225

                                            
Query: 134 acgaactcgaatctgctctcgtcacacccaaag 166
           | |||||  ||| ||||||||||||||||||||
Sbjct: 226 aggaactgaaatttgctctcgtcacacccaaag 258