Miyakogusa Predicted Gene

Lj4g3v1335260.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1335260.1 Non Chatacterized Hit- tr|I1MUR5|I1MUR5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.13,0,seg,NULL;
MatE,Multi antimicrobial extrusion protein; matE: MATE efflux family
protein,Multi antimic,CUFF.49039.1
         (1579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV417402 similar to UniRef100_A7QVK5 Cluster: Chromosom...   105   8e-22
gnl|LJGI|BW619651 similar to UniRef100_A7QKF4 Cluster: Chromosom...    92   1e-17

>gnl|LJGI|AV417402 similar to UniRef100_A7QVK5 Cluster: Chromosome chr16 scaffold_189,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_189, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 371

 Score =  105 bits (53), Expect = 8e-22
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                       
Query: 844 gtttgctttgaatggtggtggtatgaaatcatgattttgctatgcgggttgttgattaat 903
           |||||| | ||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 252 gtttgcctcgaatggtggtggtatgaaatcatgattttactctgcggtttgttgataaat 311

                                                                
Query: 904 ccctctgcaagcgttgcttccatgggggttttgattcaaaccacatcattgat 956
           ||   ||||| |||||| || ||||||||| |||||||||||||  |||||||
Sbjct: 312 cctcatgcaaccgttgcctcaatgggggttctgattcaaaccactgcattgat 364



 Score = 65.9 bits (33), Expect = 7e-10
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 625 cttcacatccccatcaattacctccttgtctctgctctcaaattgggaatcaaaggcatc 684
           ||||||||||||||||| |||||||| ||||| | |||  |  | ||||||| |||||| 
Sbjct: 33  cttcacatccccatcaactacctcctcgtctcggttcttcacctcggaatcagaggcatt 92

                                        
Query: 685 gctttagcctctgtttggaccaatttcaa 713
           ||||||| | |||||||||| ||||||||
Sbjct: 93  gctttaggcgctgtttggacaaatttcaa 121


>gnl|LJGI|BW619651 similar to UniRef100_A7QKF4 Cluster: Chromosome chr2 scaffold_112,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_112, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 484

 Score = 91.7 bits (46), Expect = 1e-17
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 1222 acggtatgtggcgttttgaggggaaccgctaggccgaaattgggagcacacataaacttg 1281
            ||||| || |||||||||||||| || || ||||||||  |||| ||  |  | ||||||
Sbjct: 482  acggtttgcggcgttttgagggggacggcgaggccgaagctgggggctaatgtgaacttg 423

                                                                        
Query: 1282 ggttgcttctatcttgtgggaatgcctgtttcagtgtggttgagcttctttgcagggttt 1341
             ||||||||||  | || |||||||| ||  | ||||||||||| |||||||  ||||||
Sbjct: 422  tgttgcttctacttcgtcggaatgccggtggcggtgtggttgagtttctttgttgggttt 363

                                                  
Query: 1342 gatttcaaaggcttgtggcttggtatgttggcagctca 1379
            |||||||||||||||||||| ||| ||||||| |||||
Sbjct: 362  gatttcaaaggcttgtggctgggtttgttggcggctca 325