Miyakogusa Predicted Gene

Lj4g3v1333420.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1333420.1 Non Chatacterized Hit- tr|I1LJS8|I1LJS8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20372 PE,73.57,0,C2
DOMAIN-CONTAINING PROTEIN,NULL; SYNAPTOTAGMIN,NULL; no
description,NULL; Protein kinase C conserv,CUFF.48987.1
         (1183 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP042257 similar to UniRef100_A7PVT7 Cluster: Chromosom...   153   3e-36
gnl|LJGI|TC72951 homologue to UniRef100_A2Q4U9 Cluster: C2; n=1;...    56   5e-07

>gnl|LJGI|BP042257 similar to UniRef100_A7PVT7 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 460

 Score =  153 bits (77), Expect = 3e-36
 Identities = 161/189 (85%)
 Strand = Plus / Minus

                                                                        
Query: 937  ggtgacttggccactcaaggagaaaggttccacaatttgctaagttggagagaccctaga 996
            ||||||||||| |||||||||||||||||||| | |||| ||||||||||||| || |||
Sbjct: 386  ggtgacttggctactcaaggagaaaggttccagagtttgataagttggagagatccaaga 327

                                                                        
Query: 997  gctaccactctatttgtcacattctgttccatcgctgcttttgttctgtatgtcactcca 1056
            ||||||||||| ||||| ||||||||||  || |||||| | ||||| ||||| ||||| 
Sbjct: 326  gctaccactctctttgtgacattctgtttaattgctgctatagttctttatgttactccc 267

                                                                        
Query: 1057 ttccaagttgtgtcccttcttagtggattctatgtgctaaggcatcccagattccgccag 1116
            || || |||||||  |||||   ||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 266  tttcaggttgtgtgtcttctctttggcttctacgtgctgaggcacccgagattccgccag 207

                     
Query: 1117 aaacttcca 1125
            |||||||||
Sbjct: 206  aaacttcca 198


>gnl|LJGI|TC72951 homologue to UniRef100_A2Q4U9 Cluster: C2; n=1; Medicago
            truncatula|Rep: C2 - Medicago truncatula (Barrel medic),
            partial (14%)
          Length = 582

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 103/128 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1037 ttgttctgtatgtcactccattccaagttgtgtcccttcttagtggattctatgtgctaa 1096
            ||||||| |||||||| ||||||||||||||| | ||||| | |||| | |||||| |  
Sbjct: 176  ttgttctctatgtcacaccattccaagttgtggcacttctcactggaatttatgtgttgc 235

                                                                        
Query: 1097 ggcatcccagattccgccagaaacttccaccattgtcactaaatttcttcaagaggttgc 1156
            | ||||| || |||||||| || |||||  |  || | || |||||||||| |||| |||
Sbjct: 236  gacatccgaggttccgccataagcttccttctgtgccgctgaatttcttcaggaggctgc 295

                    
Query: 1157 ctgcaaga 1164
            ||||||||
Sbjct: 296  ctgcaaga 303