Miyakogusa Predicted Gene
- Lj4g3v1328820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1328820.1 tr|I0Z4X8|I0Z4X8_9CHLO Hydroxymethylglutaryl-CoA
synthase OS=Coccomyxa subellipsoidea C-169 PE=4
SV=,42.86,4e-19,SUBFAMILY NOT NAMED,NULL; HYDROXYMETHYLGLUTARYL-COA
SYNTHASE,NULL; Thiolase-like,Thiolase-like; HMG_,CUFF.48933.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66009 similar to UniRef100_A7QKD9 Cluster: Chromosome... 803 0.0
gnl|LJGI|TC68876 similar to UniRef100_Q6QLW8 Cluster: HMG-CoA sy... 327 3e-89
gnl|LJGI|GO012625 similar to UniRef100_A7QKD9 Cluster: Chromosom... 287 3e-77
gnl|LJGI|GO019971 homologue to UniRef100_Q6QLW8 Cluster: HMG-CoA... 62 3e-09
gnl|LJGI|TC69215 similar to UniRef100_A7QKD9 Cluster: Chromosome... 52 3e-06
>gnl|LJGI|TC66009 similar to UniRef100_A7QKD9 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 813
Score = 803 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Plus
Query: 1 atgtacactgcatcactctatgcagcatttgtttcgcttattcacaacaaacatagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgtacactgcatcactctatgcagcatttgtttcgcttattcacaacaaacatagcaca 170
Query: 61 ttggcaggcaagagggtgatactattctcttatggaagtggcttaaccgccacaatgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ttggcaggcaagagggtgatactattctcttatggaagtggcttaaccgccacaatgttc 230
Query: 121 tctttgcaattacgtgacgggaaacatccatttagcttgtcaaacattgctacagtgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tctttgcaattacgtgacgggaaacatccatttagcttgtcaaacattgctacagtgatg 290
Query: 181 gatgtagctggaaaattgaagtcaaggaaggagtttcctccggagaagtttgttgaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gatgtagctggaaaattgaagtcaaggaaggagtttcctccggagaagtttgttgaaatc 350
Query: 241 atgaagctaatggaacataggtatggcagcaaggaatatgtaacaagcaaggaaactagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgaagctaatggaacataggtatggcagcaaggaatatgtaacaagcaaggaaactagc 410
Query: 301 cttctatcttctggcacattctatctcactgaagttgacaacatgtataggagattctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cttctatcttctggcacattctatctcactgaagttgacaacatgtataggagattctat 470
Query: 361 gaacagaaaactagtgaaagcgctttgagtgccaatggtcactga 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaacagaaaactagtgaaagcgctttgagtgccaatggtcactga 515
>gnl|LJGI|TC68876 similar to UniRef100_Q6QLW8 Cluster: HMG-CoA synthase 2; n=1; Hevea
brasiliensis|Rep: HMG-CoA synthase 2 - Hevea brasiliensis
(Para rubber tree), partial (96%)
Length = 1641
Score = 327 bits (165), Expect = 3e-89
Identities = 321/373 (86%)
Strand = Plus / Plus
Query: 1 atgtacactgcatcactctatgcagcatttgtttcgcttattcacaacaaacatagcaca 60
||||||||||| || ||||||||||| |||| || |||||||| ||||| |||||||||
Sbjct: 1059 atgtacactgcgtctctctatgcagcctttgcatcccttattcataacaagcatagcaca 1118
Query: 61 ttggcaggcaagagggtgatactattctcttatggaagtggcttaaccgccacaatgttc 120
|||||||| || ||||||||| ||||||| ||||||||||||||||| | ||||||||
Sbjct: 1119 ttggcaggaaaaagggtgatattattctcatatggaagtggcttaacttcaacaatgttt 1178
Query: 121 tctttgcaattacgtgacgggaaacatccatttagcttgtcaaacattgctacagtgatg 180
||||||||||| | || || |||||||||||||||||||||||||||| |||||||
Sbjct: 1179 tctttgcaatttagcgaaggtcaacatccatttagcttgtcaaacattgcccgagtgatg 1238
Query: 181 gatgtagctggaaaattgaagtcaaggaaggagtttcctccggagaagtttgttgaaatc 240
||||| |||||||||||||| ||||| | ||||||||||| ||||||||||| ||||||
Sbjct: 1239 gatgttgctggaaaattgaaatcaagacatgagtttcctccagagaagtttgtcgaaatc 1298
Query: 241 atgaagctaatggaacataggtatggcagcaaggaatatgtaacaagcaaggaaactagc 300
||||||||||||| ||||||||||| |||||| | ||| ||||||||||| | ||||
Sbjct: 1299 ctgaagctaatggagcataggtatggtgccaaggagtttgtgacaagcaaggatattagc 1358
Query: 301 cttctatcttctggcacattctatctcactgaagttgacaacatgtataggagattctat 360
||| ||||| | ||||||||||||||||| |||||||| |||||| |||||||||||
Sbjct: 1359 cttttatctccaggcacattctatctcaccgaagttgattccatgtaccggagattctat 1418
Query: 361 gaacagaaaacta 373
||| |||||||||
Sbjct: 1419 gaagagaaaacta 1431
>gnl|LJGI|GO012625 similar to UniRef100_A7QKD9 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 757
Score = 287 bits (145), Expect = 3e-77
Identities = 314/369 (85%), Gaps = 1/369 (0%)
Strand = Plus / Plus
Query: 1 atgtacactgcatcactctatgcagcatttgtttcgcttattcacaacaaacatagcaca 60
||||||||||| || ||||||||||| |||| || |||||||| ||||| |||||||||
Sbjct: 361 atgtacactgcgtctctctatgcagcctttgcatcccttattcataacaagcatagcaca 420
Query: 61 ttggcaggcaagagggtgatactattctcttatggaagtggcttaaccgccacaatgttc 120
|||||||| || ||||||||| ||||||| ||||||||||||||||| | ||||||||
Sbjct: 421 ttggcaggaaaaagggtgatattattctcatatggaagtggcttaacttcaacaatgttt 480
Query: 121 tctttgcaattacgtgacgggaaacatccatttagcttgtcaaacattgctacagtgatg 180
||||||||||| | || || |||||||||||||||||||||||||||| |||||||
Sbjct: 481 tctttgcaatttagcgaaggtcaacatccatttagcttgtcaaacattgcccgagtgatg 540
Query: 181 gatgtagctggaaaattgaagtcaaggaaggagtttcctccggagaagtttgttgaaatc 240
||||| |||||||||||||| ||||| | ||||||||||| |||||| |||| ||||||
Sbjct: 541 gatgttgctggaaaattgaaatcaagacatgagtttcctccagagaagattgtcgaaatc 600
Query: 241 atgaagctaatggaacataggtatggcagcaaggaatatgtaacaagcaaggaaactagc 300
||||||||||||| |||| |||||| |||||| | ||| |||||||| || | ||||
Sbjct: 601 ctgaagctaatggagcata-gtatggtgccaaggagtttgtgacaagcaaagatattagc 659
Query: 301 cttctatcttctggcacattctatctcactgaagttgacaacatgtataggagattctat 360
||| ||||| | ||||||||||||||||| |||||||| |||||| |||||||||||
Sbjct: 660 cttttatctccaggcacattctatctcaccgaagttgattccatgtaccggagattctat 719
Query: 361 gaacagaaa 369
||| |||||
Sbjct: 720 gaagagaaa 728
>gnl|LJGI|GO019971 homologue to UniRef100_Q6QLW8 Cluster: HMG-CoA synthase 2; n=1;
Hevea brasiliensis|Rep: HMG-CoA synthase 2 - Hevea
brasiliensis (Para rubber tree), partial (52%)
Length = 727
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 atgtacactgcatcactctatgcagcatttgtttcgcttattcacaacaaacatagcaca 60
||||||||||| || ||||||||||| |||| || |||||||| ||||| |||||||||
Sbjct: 665 atgtacactgcgtctctctatgcagcctttgcatcccttattcataacaagcatagcaca 724
Query: 61 ttg 63
|||
Sbjct: 725 ttg 727
>gnl|LJGI|TC69215 similar to UniRef100_A7QKD9 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 974
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 85 ttctcttatggaagtggcttaaccgccacaatgttctc 122
||||||||||| ||||| |||||||| |||||||||||
Sbjct: 476 ttctcttatgggagtggtttaaccgctacaatgttctc 513