Miyakogusa Predicted Gene

Lj4g3v1327700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1327700.1 tr|Q7S590|Q7S590_NEUCR Predicted protein
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS ,40.43,1.2,
,CUFF.48877.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62819                                                      565   e-161
gnl|LJGI|TC71993 similar to UniRef100_A7NSS0 Cluster: Chromosome...    74   5e-13

>gnl|LJGI|TC62819 
          Length = 1033

 Score =  565 bits (285), Expect = e-161
 Identities = 285/285 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctaatttcaatttcgcagggagctaccacatggcacaacaacaataaggaatggagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 atgctaatttcaatttcgcagggagctaccacatggcacaacaacaataaggaatggagt 834

                                                                       
Query: 61  attaaggtaaatggagaaacaccagtgagcttcacatggattgtcagggaattactttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 attaaggtaaatggagaaacaccagtgagcttcacatggattgtcagggaattactttca 774

                                                                       
Query: 121 gatccacctttgcacattatcttaactgggaacaacaacagcaaagcactgacagaaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gatccacctttgcacattatcttaactgggaacaacaacagcaaagcactgacagaaaaa 714

                                                                       
Query: 181 cctgagctcaacagccttccacacattaccaaagaagatcaacatcatggtcagcaatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cctgagctcaacagccttccacacattaccaaagaagatcaacatcatggtcagcaatca 654

                                                        
Query: 241 gccaaacactgtgatcaaacatcacccactcccagacaaatgtga 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gccaaacactgtgatcaaacatcacccactcccagacaaatgtga 609


>gnl|LJGI|TC71993 similar to UniRef100_A7NSS0 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 568

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 40  aacaacaataaggaatggagtattaaggtaaatggagaaacaccagtgagcttcaca 96
           |||||||||| | |||||||||||||||||  |||||||||||||| ||||||||||
Sbjct: 169 aacaacaatatgaaatggagtattaaggtagttggagaaacaccagggagcttcaca 113