Miyakogusa Predicted Gene
- Lj4g3v1327690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1327690.1 Non Chatacterized Hit- tr|I3SCE2|I3SCE2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,40.54,0.00006,seg,NULL,CUFF.48873.1
(333 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322515 similar to UniRef100_A4CSN4 Cluster: Preprotei... 466 e-131
gnl|LJGI|FS343387 similar to UniRef100_Q8GTX9 Cluster: Cell cycl... 416 e-116
gnl|LJGI|BW597024 similar to UniRef100_Q8GTX9 Cluster: Cell cycl... 248 2e-65
gnl|LJGI|TC80794 similar to UniRef100_Q8GTX9 Cluster: Cell cycle... 220 4e-57
gnl|LJGI|TC67970 similar to UniRef100_Q8GTX9 Cluster: Cell cycle... 98 4e-20
gnl|LJGI|TC66986 similar to UniRef100_Q8GTX9 Cluster: Cell cycle... 58 4e-08
gnl|LJGI|TC76268 similar to UniRef100_Q8GTX9 Cluster: Cell cycle... 56 1e-07
>gnl|LJGI|FS322515 similar to UniRef100_A4CSN4 Cluster: Preprotein translocase SecY;
n=1; Synechococcus sp. WH 7805|Rep: Preprotein
translocase, partial (2%)
Length = 778
Score = 466 bits (235), Expect = e-131
Identities = 256/263 (97%)
Strand = Plus / Plus
Query: 28 aggtttcgatttaaagtggaggtttttgatgggcaagatagtgctgtcttcttgctattt 87
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 351 aggtttcgatttaaagtggaggtttttgatgggcgagatagtgctgtcttcttgctattt 410
Query: 88 gatcttgaggcagagcttttagctggcttttcatgtgaaaagattctgaacactattgaa 147
||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 411 gatcttgaggcagagcttttaacgggcttttcatgtgaaaagcttctgaacactattgaa 470
Query: 148 attgagaagaaagtcattcatgatggtgattacccatatgacattgaagaacgcctagct 207
|||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 471 attgagaataaagtcattcctgatggtgattacccagatgacattgaagaacgcctagct 530
Query: 208 ggcaaagaaatgctattcaaagtgtgcaacaattctagggttaagcatgaccgagatgat 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggcaaagaaatgctattcaaagtgtgcaacaattctagggttaagcatgaccgagatgat 590
Query: 268 tgcttccaaattcttaggatatg 290
|||||||||||||||||||||||
Sbjct: 591 tgcttccaaattcttaggatatg 613
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 290 gcaaagttctctccccctttagtgagctggacataactggagag 333
|||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 675 gcaaagttctctccccctttagtgagatggacataactgaagag 718
>gnl|LJGI|FS343387 similar to UniRef100_Q8GTX9 Cluster: Cell cycle control crn
(Crooked neck) protein-like; n=1; Arabidopsis
thaliana|Rep: Cell cycle control crn (Crooked neck)
protein-like - Arabidopsis thaliana (Mouse-ear cress),
partial (6%)
Length = 701
Score = 416 bits (210), Expect = e-116
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 1 atgctattggaaaggctcctaaagataaggtttcgatttaaagtggaggtttttgatggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atgctattggaaaggctcctaaagataaggtttcgatttaaagtggaggtttttgatggg 551
Query: 61 caagatagtgctgtcttcttgctatttgatcttgaggcagagcttttagctggcttttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 caagatagtgctgtcttcttgctatttgatcttgaggcagagcttttagctggcttttca 611
Query: 121 tgtgaaaagattctgaacactattgaaattgagaagaaagtcattcatgatggtgattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgtgaaaagattctgaacactattgaaattgagaagaaagtcattcatgatggtgattac 671
Query: 181 ccatatgacattgaagaacgcctagctggc 210
||||||||||||||||||||||||||||||
Sbjct: 672 ccatatgacattgaagaacgcctagctggc 701
>gnl|LJGI|BW597024 similar to UniRef100_Q8GTX9 Cluster: Cell cycle control crn
(Crooked neck) protein-like; n=1; Arabidopsis
thaliana|Rep: Cell cycle control crn (Crooked neck)
protein-like - Arabidopsis thaliana (Mouse-ear cress),
partial (6%)
Length = 483
Score = 248 bits (125), Expect = 2e-65
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 1 atgctattggaaaggctcctaaagataaggtttcgatttaaagtggaggtttttgatggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atgctattggaaaggctcctaaagataaggtttcgatttaaagtggaggtttttgatggg 418
Query: 61 caagatagtgctgtcttcttgctatttgatcttgaggcagagcttttagctggcttttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 caagatagtgctgtcttcttgctatttgatcttgaggcagagcttttagctggcttttca 478
Query: 121 tgtga 125
|||||
Sbjct: 479 tgtga 483
>gnl|LJGI|TC80794 similar to UniRef100_Q8GTX9 Cluster: Cell cycle control crn
(Crooked neck) protein-like; n=1; Arabidopsis
thaliana|Rep: Cell cycle control crn (Crooked neck)
protein-like - Arabidopsis thaliana (Mouse-ear cress),
partial (6%)
Length = 747
Score = 220 bits (111), Expect = 4e-57
Identities = 135/143 (94%)
Strand = Plus / Plus
Query: 148 attgagaagaaagtcattcatgatggtgattacccatatgacattgaagaacgcctagct 207
||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||
Sbjct: 443 attgagaagaaagtcattcctaatggtgattacccagatgacattgaagaatgcctagct 502
Query: 208 ggcaaagaaatgctattcaaagtgtgcaacaattctagggttaagcatgaccgagatgat 267
|||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 503 ggcaaagaaatgctattcaaagtgtgcaacaattctggagttaagcatgatcgagatgat 562
Query: 268 tgcttccaaattcttaggatatg 290
|||||||||||||| ||||||||
Sbjct: 563 tgcttccaaattctaaggatatg 585
Score = 65.9 bits (33), Expect = 1e-10
Identities = 43/45 (95%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 290 gcaaagttctctcccc-ctttagtgagctggacataactggagag 333
|||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 647 gcaaagttctctcccccctttagtgagctggacataactgaagag 691
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tattggaaaggctcctaaagataag 29
|||||||||||||||||||||||||
Sbjct: 418 tattggaaaggctcctaaagataag 442
>gnl|LJGI|TC67970 similar to UniRef100_Q8GTX9 Cluster: Cell cycle control crn
(Crooked neck) protein-like; n=1; Arabidopsis
thaliana|Rep: Cell cycle control crn (Crooked neck)
protein-like - Arabidopsis thaliana (Mouse-ear cress),
partial (6%)
Length = 860
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 148 attgagaagaaagtcattcatgatggtgattacccatatgacattgaagaacgcctagct 207
||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||
Sbjct: 796 attgagaagaaagtcattcctaatggtgattacccagatgacattgaagaatgcctagct 855
Query: 208 ggcaa 212
|||||
Sbjct: 856 ggcaa 860
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tattggaaaggctcctaaagataag 29
|||||||||||||||||||||||||
Sbjct: 771 tattggaaaggctcctaaagataag 795
>gnl|LJGI|TC66986 similar to UniRef100_Q8GTX9 Cluster: Cell cycle control crn
(Crooked neck) protein-like; n=1; Arabidopsis
thaliana|Rep: Cell cycle control crn (Crooked neck)
protein-like - Arabidopsis thaliana (Mouse-ear cress),
partial (44%)
Length = 1425
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atgctattggaaaggctcctaaagataag 29
|||||||||||||||||||||||||||||
Sbjct: 326 atgctattggaaaggctcctaaagataag 354
>gnl|LJGI|TC76268 similar to UniRef100_Q8GTX9 Cluster: Cell cycle control crn
(Crooked neck) protein-like; n=1; Arabidopsis
thaliana|Rep: Cell cycle control crn (Crooked neck)
protein-like - Arabidopsis thaliana (Mouse-ear cress),
partial (13%)
Length = 521
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 tgctattggaaaggctcctaaagataag 29
||||||||||||||||||||||||||||
Sbjct: 25 tgctattggaaaggctcctaaagataag 52