Miyakogusa Predicted Gene
- Lj4g3v1327590.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1327590.2 tr|Q4TU48|Q4TU48_LOTJA Cell cycle switch protein
CCS52A OS=Lotus japonicus PE=2 SV=1,99.79,0,WD_REPEATS_1,WD40 repeat,
conserved site; no description,WD40/YVTN repeat-like-containing
domain; WD,CUFF.48842.2
(1467 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59067 UniRef100_Q4TU48 Cluster: Cell cycle switch pro... 2706 0.0
gnl|LJGI|TC66719 UniRef100_Q4TU48 Cluster: Cell cycle switch pro... 1037 0.0
gnl|LJGI|TC72031 homologue to UniRef100_Q4TU48 Cluster: Cell cyc... 502 e-141
>gnl|LJGI|TC59067 UniRef100_Q4TU48 Cluster: Cell cycle switch protein CCS52A; n=1;
Lotus japonicus|Rep: Cell cycle switch protein CCS52A -
Lotus japonicus, complete
Length = 2030
Score = 2706 bits (1365), Expect = 0.0
Identities = 1365/1365 (100%)
Strand = Plus / Plus
Query: 103 gcggagagtctccgccacgtggaacgcatgatcaactccaaccactacgcatctccttcc 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gcggagagtctccgccacgtggaacgcatgatcaactccaaccactacgcatctccttcc 198
Query: 163 agaacaatctactccgacaggttcattcccagcagatctgcctccaaattcgccttgttt 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 agaacaatctactccgacaggttcattcccagcagatctgcctccaaattcgccttgttt 258
Query: 223 gacatctccactcccccggagggccgcgacgacacctccagcgcctacaccactctcctc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gacatctccactcccccggagggccgcgacgacacctccagcgcctacaccactctcctc 318
Query: 283 cgcaccgctttgttcggtcccgatgccgccggcgtcgctcctcctgtcacgccggacaag 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cgcaccgctttgttcggtcccgatgccgccggcgtcgctcctcctgtcacgccggacaag 378
Query: 343 aggtcgtctccgtcgatgtccttgcctagccggaatattttccggtacaagatggagact 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aggtcgtctccgtcgatgtccttgcctagccggaatattttccggtacaagatggagact 438
Query: 403 cgccagtccatgcactcgctttccccgttcatgagcgacgatgcggttcccggcgtgaat 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cgccagtccatgcactcgctttccccgttcatgagcgacgatgcggttcccggcgtgaat 498
Query: 463 ccgagccccgtcaagactccgaggaaggttccgcgatctccttataaggttctggatgca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccgagccccgtcaagactccgaggaaggttccgcgatctccttataaggttctggatgca 558
Query: 523 cctgcattgcaagacgatttctatctgaatctcgtggattggtcttcgcacaatgtgttg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cctgcattgcaagacgatttctatctgaatctcgtggattggtcttcgcacaatgtgttg 618
Query: 583 gctgttggtttgggtaactgtgtttatctctggaatgcttgtagtagcaaggtaactaaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gctgttggtttgggtaactgtgtttatctctggaatgcttgtagtagcaaggtaactaaa 678
Query: 643 ttatgtgacttggggattgacgactgcgtttgttcagttggctgggctcaacgcggtaca 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttatgtgacttggggattgacgactgcgtttgttcagttggctgggctcaacgcggtaca 738
Query: 703 catcttgctgttggaactagcaatggcaaagttcagatttgggatgcatctcgatgcaag 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 catcttgctgttggaactagcaatggcaaagttcagatttgggatgcatctcgatgcaag 798
Query: 763 aagataagatccatggagggtcatcgactacgcgttggggccttggcctggagttcatct 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aagataagatccatggagggtcatcgactacgcgttggggccttggcctggagttcatct 858
Query: 823 cttttgtcttctggtggccgggataagaatatttatcaacgagatatacgtgcacaagaa 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 cttttgtcttctggtggccgggataagaatatttatcaacgagatatacgtgcacaagaa 918
Query: 883 gattatgtcagtaaactgtcagggcacaaatcagaggtttgtggactgaagtggtcatat 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 gattatgtcagtaaactgtcagggcacaaatcagaggtttgtggactgaagtggtcatat 978
Query: 943 gataaccgtgagttggcatctggaggaaatgacaacagattgtttgtttggaatcaacac 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gataaccgtgagttggcatctggaggaaatgacaacagattgtttgtttggaatcaacac 1038
Query: 1003 tcaacccaacctgttctgaagtattgtgagcatacagcagctgttaaagctattgcatgg 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 tcaacccaacctgttctgaagtattgtgagcatacagcagctgttaaagctattgcatgg 1098
Query: 1063 tctcctcatcttcatggacttcttgcatctgggggtggaacagcagatcgatgtattcgc 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 tctcctcatcttcatggacttcttgcatctgggggtggaacagcagatcgatgtattcgc 1158
Query: 1123 ttttggaatacaaccacaaactcgcacttaagctgtatggacactggaagtcaggtatgc 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 ttttggaatacaaccacaaactcgcacttaagctgtatggacactggaagtcaggtatgc 1218
Query: 1183 aaccttgtctggtccaaaaatgtcaatgaactagtaagcacacatggctactcccagaat 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 aaccttgtctggtccaaaaatgtcaatgaactagtaagcacacatggctactcccagaat 1278
Query: 1243 caaataattgtttggagataccccaccatgtcaaagttggccactcttacaggccatacg 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 caaataattgtttggagataccccaccatgtcaaagttggccactcttacaggccatacg 1338
Query: 1303 tatagagttctttatcttgccatctctccagatgggcagactattgtaactggagctgga 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 tatagagttctttatcttgccatctctccagatgggcagactattgtaactggagctgga 1398
Query: 1363 gatgaaacacttaggttctggaatgtattcccttccccaaaatcacagaatactgacagt 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 gatgaaacacttaggttctggaatgtattcccttccccaaaatcacagaatactgacagt 1458
Query: 1423 gaaattggagcatcttctcttggaagaactattataaggtgatgg 1467
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 gaaattggagcatcttctcttggaagaactattataaggtgatgg 1503
>gnl|LJGI|TC66719 UniRef100_Q4TU48 Cluster: Cell cycle switch protein CCS52A; n=1;
Lotus japonicus|Rep: Cell cycle switch protein CCS52A -
Lotus japonicus, partial (43%)
Length = 812
Score = 1037 bits (523), Expect = 0.0
Identities = 523/523 (100%)
Strand = Plus / Plus
Query: 103 gcggagagtctccgccacgtggaacgcatgatcaactccaaccactacgcatctccttcc 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcggagagtctccgccacgtggaacgcatgatcaactccaaccactacgcatctccttcc 349
Query: 163 agaacaatctactccgacaggttcattcccagcagatctgcctccaaattcgccttgttt 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agaacaatctactccgacaggttcattcccagcagatctgcctccaaattcgccttgttt 409
Query: 223 gacatctccactcccccggagggccgcgacgacacctccagcgcctacaccactctcctc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gacatctccactcccccggagggccgcgacgacacctccagcgcctacaccactctcctc 469
Query: 283 cgcaccgctttgttcggtcccgatgccgccggcgtcgctcctcctgtcacgccggacaag 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cgcaccgctttgttcggtcccgatgccgccggcgtcgctcctcctgtcacgccggacaag 529
Query: 343 aggtcgtctccgtcgatgtccttgcctagccggaatattttccggtacaagatggagact 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aggtcgtctccgtcgatgtccttgcctagccggaatattttccggtacaagatggagact 589
Query: 403 cgccagtccatgcactcgctttccccgttcatgagcgacgatgcggttcccggcgtgaat 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cgccagtccatgcactcgctttccccgttcatgagcgacgatgcggttcccggcgtgaat 649
Query: 463 ccgagccccgtcaagactccgaggaaggttccgcgatctccttataaggttctggatgca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ccgagccccgtcaagactccgaggaaggttccgcgatctccttataaggttctggatgca 709
Query: 523 cctgcattgcaagacgatttctatctgaatctcgtggattggtcttcgcacaatgtgttg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 cctgcattgcaagacgatttctatctgaatctcgtggattggtcttcgcacaatgtgttg 769
Query: 583 gctgttggtttgggtaactgtgtttatctctggaatgcttgta 625
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gctgttggtttgggtaactgtgtttatctctggaatgcttgta 812
>gnl|LJGI|TC72031 homologue to UniRef100_Q4TU48 Cluster: Cell cycle switch protein
CCS52A; n=1; Lotus japonicus|Rep: Cell cycle switch
protein CCS52A - Lotus japonicus, partial (34%)
Length = 840
Score = 502 bits (253), Expect = e-141
Identities = 427/485 (88%)
Strand = Plus / Plus
Query: 970 aatgacaacagattgtttgtttggaatcaacactcaacccaacctgttctgaagtattgt 1029
||||||||||||||| |||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 2 aatgacaacagattgcttgtttggaatcaacattcaactatgcctgtcctgaagtactta 61
Query: 1030 gagcatacagcagctgttaaagctattgcatggtctcctcatcttcatggacttcttgca 1089
||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 62 gagcatacagcagctgttaaagccattgcttggtctcctcatgttcatggacttcttgcg 121
Query: 1090 tctgggggtggaacagcagatcgatgtattcgcttttggaatacaaccacaaactcgcac 1149
|| || || ||||| ||||| ||||| ||||| || |||||||| |||||||| || |||
Sbjct: 122 tcaggtggaggaactgcagaccgatgcattcgtttctggaataccaccacaaattcacac 181
Query: 1150 ttaagctgtatggacactggaagtcaggtatgcaaccttgtctggtccaaaaatgtcaat 1209
||||| || |||||||||||||||||||| || || ||| ||||||||||||||||||||
Sbjct: 182 ttaagttgcatggacactggaagtcaggtctgtaatcttatctggtccaaaaatgtcaat 241
Query: 1210 gaactagtaagcacacatggctactcccagaatcaaataattgtttggagataccccacc 1269
||||| |||||||||||||||||||||||||| || |||| |||||| |||||| ||
Sbjct: 242 gaactggtaagcacacatggctactcccagaaccagataaacatttggaaataccctgcc 301
Query: 1270 atgtcaaagttggccactcttacaggccatacgtatagagttctttatcttgccatctct 1329
||||||||| | || |||||||| || ||| | |||||||||||||||||| ||||||||
Sbjct: 302 atgtcaaaggtagcaactcttacgggtcattcttatagagttctttatctttccatctct 361
Query: 1330 ccagatgggcagactattgtaactggagctggagatgaaacacttaggttctggaatgta 1389
|| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 362 cctgatgggcagactattgtcactggagctggagatgaaactcttaggttttggaatgta 421
Query: 1390 ttcccttccccaaaatcacagaatactgacagtgaaattggagcatcttctcttggaaga 1449
|||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 422 ttcccttcccagaaatctcagaatactgaaagtggaattggagcatcatctcttggaaga 481
Query: 1450 actat 1454
|||||
Sbjct: 482 actat 486