Miyakogusa Predicted Gene
- Lj4g3v1327390.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1327390.2 Non Chatacterized Hit- tr|G3SZR7|G3SZR7_LOXAF
Uncharacterized protein OS=Loxodonta africana GN=ST13
,52.73,0.0000000002,HSC70-INTERACTING PROTEIN,NULL; TPR REPEAT
CONTAINING PROTEIN,NULL; Tetratricopeptide repeats,Tetrat,CUFF.49002.2
(1236 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57925 similar to UniRef100_A7QVC1 Cluster: Chromosome... 1889 0.0
gnl|LJGI|BW628642 similar to UniRef100_Q93YR3 Cluster: FAM10 fam... 880 0.0
gnl|LJGI|GO041306 similar to UniRef100_A7QVC1 Cluster: Chromosom... 684 0.0
gnl|LJGI|FS331502 similar to UniRef100_Q8VZH4 Cluster: Tetratric... 72 9e-12
gnl|LJGI|TC59595 similar to UniRef100_Q8VZH4 Cluster: Tetratrico... 72 9e-12
>gnl|LJGI|TC57925 similar to UniRef100_A7QVC1 Cluster: Chromosome chr2 scaffold_187,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_187, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1546
Score = 1889 bits (953), Expect = 0.0
Identities = 956/957 (99%)
Strand = Plus / Plus
Query: 1 atggacgcaacaaagctcaaagaactgaagcatttcatcgaacagtgtcagtccaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 atggacgcaacaaagctcaaagaactgaagcatttcatcgaacagtgtcagtccaaccct 86
Query: 61 tccaccctcgccgatccttcactctccttcttccgtgactacctcgaaagcctcggcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tccaccctcgccgatccttcactctccttcttccgtgactacctcgaaagcctcggcgcc 146
Query: 121 aagcttccctcttccgcttactccgattcgaagcacgaggagagcgatgatgatatagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 aagcttccctcttccgcttactccgattcgaagcacgaggagagcgatgatgatatagaa 206
Query: 181 gatcttcatgaggagcaagtgaaggtggaagaaccagaggaagatgatgagatagttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gatcttcatgaggagcaagtgaaggtggaagaaccagaggaagatgatgagatagttgaa 266
Query: 241 tctgatatcgagcttgaaggggaaatcgttgagcctgatgatgatccaccacagaagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tctgatatcgagcttgaaggggaaatcgttgagcctgatgatgatccaccacagaagatg 326
Query: 301 ggagacccctctgttgaggttactgaagagagtcgcgaggcttcgcagttggctaaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggagacccctctgttgaggttactgaagagagtcgcgaggcttcgcagttggctaaagct 386
Query: 361 aaagctatggaagcgatttctgaaggtaacttggaggaggcgattgagagcttgacagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaagctatggaagcgatttctgaaggtaacttggaggaggcgattgagagcttgacagat 446
Query: 421 gcgatttctctcaaccctacctctgccattatgtatgggaacagagctagtgtttacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcgatttctctcaaccctacctctgccattatgtatgggaacagagctagtgtttacatc 506
Query: 481 aaaatgaagaaaccgaacgctgcaatccgtgatgcaaatgctgctttggagatcaatcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaaatgaagaaaccgaacgctgcaatccgtgatgcaaatgctgctttggagatcaatcca 566
Query: 541 gattctgctaaaggatacaagacacgtggcatggcacgagcactgcttggtcagtgggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gattctgctaaaggatacaagacacgtggcatggcacgagcactgcttggtcagtgggaa 626
Query: 601 gaggctgcaaaggatcttcatgtggcttctaagttagactatgatgaggaaataagtgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaggctgcaaaggatcttcatgtggcttctaagttagactatgatgaggaaataagtgct 686
Query: 661 gtgcttaagaaggtggaacccaatgctcacaagattgaggaacaccgtcggaagtatgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtgcttaagaaggtggaacccaatgctcacaagattgaggaacaccgtcggaagtatgaa 746
Query: 721 agactgcataaggaaagagaggagaaaagaactgagcgtgagagacagcgtcgccgtgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 agactgcataaggaaagagaggagaaaagaactgagcgtgagagacagcgtcgccgtgct 806
Query: 781 gaagctcaggctgcatatgagaaggctaagaagcaggagcagtcatcttccagtagaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gaagctcaggctgcatatgagaaggctaagaagcaggagcagtcatcttccagtagaaat 866
Query: 841 cctggtggtatgcctggtgagtttcctggtatgccaggtgggttccctggtggtggtatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 cctggtggtatgcctggtgagtttcctggtatgccaggtgggttccctggtggtggtatg 926
Query: 901 ccaggtgggttccctggtggcggtatgccaggtgggttccctggtggcggcatgcca 957
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 927 ccaggtgggttccctggtggtggtatgccaggtgggttccctggtggcggcatgcca 983
Score = 412 bits (208), Expect = e-114
Identities = 208/208 (100%)
Strand = Plus / Plus
Query: 1029 cggcatgccgggaggggtgcctggaaatgttgattttagcaaaatcttgaatgaccctga 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 cggcatgccgggaggggtgcctggaaatgttgattttagcaaaatcttgaatgaccctga 1141
Query: 1089 tctgatggcagcatttagtgatccagagatcatggcagctcttcaagatgttatgaagaa 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 tctgatggcagcatttagtgatccagagatcatggcagctcttcaagatgttatgaagaa 1201
Query: 1149 ccccgcgaatttagctaagcatcagggaaatcctaaggtggctcctgtaattgctaaaat 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 ccccgcgaatttagctaagcatcagggaaatcctaaggtggctcctgtaattgctaaaat 1261
Query: 1209 gatgagtaaatttggaggtcccaagtga 1236
||||||||||||||||||||||||||||
Sbjct: 1262 gatgagtaaatttggaggtcccaagtga 1289
Score = 155 bits (78), Expect = 8e-37
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 867 tggtatgccaggtgggttccctggtggtggtatgccaggtgggttccctggtggcggtat 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 920 tggtatgccaggtgggttccctggtggtggtatgccaggtgggttccctggtggcggcat 979
Query: 927 gccaggtgggttccctggtggcggcatgcc 956
||||||||| ||||||||||| ||||||||
Sbjct: 980 gccaggtggtttccctggtggtggcatgcc 1009
Score = 131 bits (66), Expect = 1e-29
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 871 atgccaggtgggttccctggtggtggtatgccaggtgggttccctggtggcggtatgcca 930
||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 1005 atgccgggtgggttccctggtggtggcatgccgggtgggttccctggtggcggcatgccg 1064
Query: 931 ggtgggttccctggtggcggcatgcc 956
||||||||||||||||||||||||||
Sbjct: 1065 ggtgggttccctggtggcggcatgcc 1090
Score = 123 bits (62), Expect = 3e-27
Identities = 83/90 (92%)
Strand = Plus / Plus
Query: 867 tggtatgccaggtgggttccctggtggtggtatgccaggtgggttccctggtggcggtat 926
||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || ||
Sbjct: 947 tggtatgccaggtgggttccctggtggcggcatgccaggtggtttccctggtggtggcat 1006
Query: 927 gccaggtgggttccctggtggcggcatgcc 956
||| ||||||||||||||||| ||||||||
Sbjct: 1007 gccgggtgggttccctggtggtggcatgcc 1036
Score = 123 bits (62), Expect = 3e-27
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 871 atgccaggtgggttccctggtggtggtatgccaggtgggttccctggtggcggtatgcca 930
||||||||||| |||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 978 atgccaggtggtttccctggtggtggcatgccgggtgggttccctggtggtggcatgccg 1037
Query: 931 ggtgggttccctggtggcggcatgcc 956
||||||||||||||||||||||||||
Sbjct: 1038 ggtgggttccctggtggcggcatgcc 1063
>gnl|LJGI|BW628642 similar to UniRef100_Q93YR3 Cluster: FAM10 family protein
At4g22670; n=1; Arabidopsis thaliana|Rep: FAM10 family
protein At4g22670 - Arabidopsis thaliana (Mouse-ear
cress), partial (30%)
Length = 525
Score = 880 bits (444), Expect = 0.0
Identities = 453/456 (99%)
Strand = Plus / Plus
Query: 1 atggacgcaacaaagctcaaagaactgaagcatttcatcgaacagtgtcagtccaaccct 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atggacgcaacatagctcaaagaactgaagcatttcatcgaacagtgtcagtccaaccct 129
Query: 61 tccaccctcgccgatccttcactctccttcttccgtgactacctcgaaagcctcggcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tccaccctcgccgatccttcactctccttcttccgtgactacctcgaaagcctcggcgcc 189
Query: 121 aagcttccctcttccgcttactccgattcgaagcacgaggagagcgatgatgatatagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aagcttccctcttccgcttactccgattcgaagcacgaggagagcgatgatgatatagaa 249
Query: 181 gatcttcatgaggagcaagtgaaggtggaagaaccagaggaagatgatgagatagttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gatcttcatgaggagcaagtgaaggtggaagaaccagaggaagatgatgagatagttgaa 309
Query: 241 tctgatatcgagcttgaaggggaaatcgttgagcctgatgatgatccaccacagaagatg 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tctgatatcgagcttgagggggaaatcgttgagcctgatgatgatccaccacagaagatg 369
Query: 301 ggagacccctctgttgaggttactgaagagagtcgcgaggcttcgcagttggctaaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ggagacccctctgttgaggttactgaagagagtcgcgaggcttcgcagttggctaaagct 429
Query: 361 aaagctatggaagcgatttctgaaggtaacttggaggaggcgattgagagcttgacagat 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaagctatggaagcggtttctgaaggtaacttggaggaggcgattgagagcttgacagat 489
Query: 421 gcgatttctctcaaccctacctctgccattatgtat 456
||||||||||||||||||||||||||||||||||||
Sbjct: 490 gcgatttctctcaaccctacctctgccattatgtat 525
>gnl|LJGI|GO041306 similar to UniRef100_A7QVC1 Cluster: Chromosome chr2 scaffold_187,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_187, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 599
Score = 684 bits (345), Expect = 0.0
Identities = 348/349 (99%)
Strand = Plus / Minus
Query: 495 gaacgctgcaatccgtgatgcaaatgctgctttggagatcaatccagattctgctaaagg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaacgctgcaatccgtgatgcaaatgctgctttggagatcaatccagattctgctaaagg 540
Query: 555 atacaagacacgtggcatggcacgagcactgcttggtcagtgggaagaggctgcaaagga 614
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 539 atacaagacacgtggcatggcacgagcactgcttggtcagtgggaagtggctgcaaagga 480
Query: 615 tcttcatgtggcttctaagttagactatgatgaggaaataagtgctgtgcttaagaaggt 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcttcatgtggcttctaagttagactatgatgaggaaataagtgctgtgcttaagaaggt 420
Query: 675 ggaacccaatgctcacaagattgaggaacaccgtcggaagtatgaaagactgcataagga 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggaacccaatgctcacaagattgaggaacaccgtcggaagtatgaaagactgcataagga 360
Query: 735 aagagaggagaaaagaactgagcgtgagagacagcgtcgccgtgctgaagctcaggctgc 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aagagaggagaaaagaactgagcgtgagagacagcgtcgccgtgctgaagctcaggctgc 300
Query: 795 atatgagaaggctaagaagcaggagcagtcatcttccagtagaaatcct 843
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atatgagaaggctaagaagcaggagcagtcatcttccagtagaaatcct 251
Score = 123 bits (62), Expect = 3e-27
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 1175 gaaatcctaaggtggctcctgtaattgctaaaatgatgagtaaatttggaggtcccaagt 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaaatcctaaggtggctcctgtaattgctaaaatgatgagtaaatttggaggtcccaagt 199
Query: 1235 ga 1236
||
Sbjct: 198 ga 197
>gnl|LJGI|FS331502 similar to UniRef100_Q8VZH4 Cluster: Tetratricoredoxin; n=1;
Nicotiana tabacum|Rep: Tetratricoredoxin - Nicotiana
tabacum (Common tobacco), partial (39%)
Length = 703
Score = 71.9 bits (36), Expect = 9e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 485 tgaagaaaccgaacgctgcaatccgtgatgcaaatgctgctttggagatcaatccagatt 544
|||||||||| || ||||| ||||||||||| | |||| |||||||| ||||||||||
Sbjct: 577 tgaagaaaccaaatgctgctatccgtgatgctgacactgccttggagattaatccagatt 636
Query: 545 ctgctaaaggatacaa 560
| ||||||||||||||
Sbjct: 637 cagctaaaggatacaa 652
>gnl|LJGI|TC59595 similar to UniRef100_Q8VZH4 Cluster: Tetratricoredoxin; n=1;
Nicotiana tabacum|Rep: Tetratricoredoxin - Nicotiana
tabacum (Common tobacco), partial (52%)
Length = 798
Score = 71.9 bits (36), Expect = 9e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 485 tgaagaaaccgaacgctgcaatccgtgatgcaaatgctgctttggagatcaatccagatt 544
|||||||||| || ||||| ||||||||||| | |||| |||||||| ||||||||||
Sbjct: 492 tgaagaaaccaaatgctgctatccgtgatgctgacactgccttggagattaatccagatt 551
Query: 545 ctgctaaaggatacaa 560
| ||||||||||||||
Sbjct: 552 cagctaaaggatacaa 567