Miyakogusa Predicted Gene

Lj4g3v1316350.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1316350.1 CUFF.48824.1
         (328 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75073 similar to UniRef100_Q3EBW8 Cluster: Uncharacte...    54   5e-07
gnl|LJGI|TC68344 weakly similar to UniRef100_Q00497 Cluster: Shi...    54   5e-07

>gnl|LJGI|TC75073 similar to UniRef100_Q3EBW8 Cluster: Uncharacterized protein
           At2g21940.2; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At2g21940.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (59%)
          Length = 1138

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 173 caaacaattcccctccaaaattcccctcattcaac 207
           ||||||||||||||||||||||| |||| ||||||
Sbjct: 32  caaacaattcccctccaaaattctcctccttcaac 66


>gnl|LJGI|TC68344 weakly similar to UniRef100_Q00497 Cluster: Shikimate kinase,
           chloroplast precursor; n=1; Solanum lycopersicum|Rep:
           Shikimate kinase, chloroplast precursor - Solanum
           lycopersicum (Tomato) (Lycopersicon esculentum), partial
           (30%)
          Length = 754

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 173 caaacaattcccctccaaaattcccctcattcaac 207
           ||||||||||||||||||||||| |||| ||||||
Sbjct: 81  caaacaattcccctccaaaattctcctccttcaac 115