Miyakogusa Predicted Gene

Lj4g3v1316340.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1316340.1 Non Chatacterized Hit- tr|B9FLZ8|B9FLZ8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,39.53,2e-19,
,CUFF.48822.1
         (508 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61936 weakly similar to UniRef100_A7QVB9 Cluster: Chr...  1007   0.0  
gnl|LJGI|BP047847 similar to UniRef100_A6R5Y2 Cluster: Serine/th...   111   4e-24

>gnl|LJGI|TC61936 weakly similar to UniRef100_A7QVB9 Cluster: Chromosome chr2
           scaffold_187, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_187, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (45%)
          Length = 735

 Score = 1007 bits (508), Expect = 0.0
 Identities = 508/508 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgaatttacaattcagattagcaatgaacttgttaatcaacttgttgatgatccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  atgggtgaatttacaattcagattagcaatgaacttgttaatcaacttgttgatgatccg 136

                                                                       
Query: 61  gtgccaaagaagaaaattagaaggaatcgacgtaaggtggcaaaagagactgaaaagcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gtgccaaagaagaaaattagaaggaatcgacgtaaggtggcaaaagagactgaaaagcct 196

                                                                       
Query: 121 caatctaaagtaactggaaagcccgagaatgcagctgctcctgggtggccagtgcagtcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 caatctaaagtaactggaaagcccgagaatgcagctgctcctgggtggccagtgcagtcc 256

                                                                       
Query: 181 cctttgtttctacctgcaaaaccgcctgtacaacctgctgatccagagatagacggcatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cctttgtttctacctgcaaaaccgcctgtacaacctgctgatccagagatagacggcatt 316

                                                                       
Query: 241 cgatctgtgcttcgggaaagtgagaaggttttggaaagtttgcagaagcaggaggagaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cgatctgtgcttcgggaaagtgagaaggttttggaaagtttgcagaagcaggaggagaac 376

                                                                       
Query: 301 atgttgcaggaagtaacccaaaaggcaaaggatctccatgacaaagaatataagcttcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgttgcaggaagtaacccaaaaggcaaaggatctccatgacaaagaatataagcttcca 436

                                                                       
Query: 361 aacccaaagcctgagccttgcatcgctgagagacttgctacgttatcatgttacaaggaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aacccaaagcctgagccttgcatcgctgagagacttgctacgttatcatgttacaaggaa 496

                                                                       
Query: 421 catatcaaggacccgttgaagtgttctgcttttgttaccaattttgctggttgcttgcgc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 catatcaaggacccgttgaagtgttctgcttttgttaccaattttgctggttgcttgcgc 556

                                       
Query: 481 aagtttggccgttcacgggacaagtaat 508
           ||||||||||||||||||||||||||||
Sbjct: 557 aagtttggccgttcacgggacaagtaat 584


>gnl|LJGI|BP047847 similar to UniRef100_A6R5Y2 Cluster: Serine/threonine-protein
           kinase sid2; n=1; Ajellomyces capsulatus NAm1|Rep:
           Serine/, partial (2%)
          Length = 258

 Score =  111 bits (56), Expect = 4e-24
 Identities = 69/72 (95%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                       
Query: 438 gaagtgttctgctttt-gttaccaattttgctggttgcttgcgcaagtttggccgttcac 496
           |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 258 gaagtgttctgctttttgttaccaatttcgctggttgcttgcgcaagtttgcccgttcac 199

                       
Query: 497 gggacaagtaat 508
           ||||||||||||
Sbjct: 198 gggacaagtaat 187