Miyakogusa Predicted Gene
- Lj4g3v1314980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1314980.1 Non Chatacterized Hit- tr|I1K0H0|I1K0H0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.14,0,NUCEPIMERASE,Nucleotide sugar epimerase; UDP-GLUCURONATE
5-EPIMERASE,NULL; NAD DEPENDENT
EPIMERASE/D,NODE_49789_length_1212_cov_121.575905.path2.1
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72487 similar to UniRef100_Q9LPC1 Cluster: UDP-glucur... 995 0.0
gnl|LJGI|TC58317 similar to UniRef100_Q9STI6 Cluster: UDP-glucur... 644 0.0
gnl|LJGI|BW612068 similar to UniRef100_Q9STI6 Cluster: UDP-glucu... 549 e-155
gnl|LJGI|BW614490 similar to UniRef100_Q9STI6 Cluster: UDP-glucu... 391 e-108
gnl|LJGI|TC72474 similar to UniRef100_Q9STI6 Cluster: UDP-glucur... 329 2e-89
gnl|LJGI|TC70758 similar to UniRef100_Q304Y2 Cluster: UDP-glucur... 234 1e-60
gnl|LJGI|TC61079 115 6e-25
gnl|LJGI|TC75938 similar to UniRef100_A7Q721 Cluster: Chromosome... 90 3e-17
gnl|LJGI|TC81011 similar to UniRef100_Q9LIS3 Cluster: UDP-glucur... 60 3e-08
>gnl|LJGI|TC72487 similar to UniRef100_Q9LPC1 Cluster: UDP-glucuronate 4-epimerase 2;
n=2; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 2 - Arabidopsis thaliana (Mouse-ear cress),
partial (38%)
Length = 778
Score = 995 bits (502), Expect = 0.0
Identities = 505/506 (99%)
Strand = Plus / Plus
Query: 177 gccgccacccgccgcaccccgccgcgtcctcggcgactcatggggcggccctctttggga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gccgccacccgccgcaccccgccgcgtcctcggcgactcatggggcggccctctttggga 332
Query: 237 gaagcgcgtcgccaagtcagctcgtcgcacttccgcctccggcctcaccgtcctcgtcac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaagcgcgtcgccaagtcagctcgtcgcacttccgcctccggcctcaccgtcctcgtcac 392
Query: 297 cggcgctgcaggcttcgtcggcacacacgtatccttagcgctgaagcgccgcggtgatgg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cggcgctgcaggcttcgtcggcacacacgtatccttagcgctgaagcgccgcggtgatgg 452
Query: 357 cgtcctcggtctcgacaacttcaaccgctactacgaccccaacctcaagcgcgcccgcca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cgtcctcggtctcgacaacttcaaccgctactacgaccccaacctcaagcgcgcccgcca 512
Query: 417 gaggctcctcgaccgcgccggcgtgtttgtcgtctccggcgacgtcaacgacgctgcgct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 513 gaggctcctcgaccgcgccggcgtgtttgtcgtctccggcgacgtcaacgacgctacgct 572
Query: 477 actccggaagctcttcgacgttgtgccgtttactcacgtgatgcacctcgccgcgcaggc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 actccggaagctcttcgacgttgtgccgtttactcacgtgatgcacctcgccgcgcaggc 632
Query: 537 tggggttcgctacgcgatgcagaaccctggatcgtacgtgcacagcaacatcgccgggtt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tggggttcgctacgcgatgcagaaccctggatcgtacgtgcacagcaacatcgccgggtt 692
Query: 597 cgtgaaccttctggaagcttgcaaatcggcgaacccgcaaccctccatcgtctgggcttc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cgtgaaccttctggaagcttgcaaatcggcgaacccgcaaccctccatcgtctgggcttc 752
Query: 657 gtcgagctccgtttacggcttgaact 682
||||||||||||||||||||||||||
Sbjct: 753 gtcgagctccgtttacggcttgaact 778
Score = 220 bits (111), Expect = 1e-56
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 atgatggaggtgaatgagcaaacaccttcaacaccaggcaaattgaagccagataaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 atgatggaggtgaatgagcaaacaccttcaacaccaggcaaattgaagccagataaatct 156
Query: 61 ccctatattcaccaccgcttcagaatccactcatcactctccaggctcaca 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ccctatattcaccaccgcttcagaatccactcatcactctccaggctcaca 207
>gnl|LJGI|TC58317 similar to UniRef100_Q9STI6 Cluster: UDP-glucuronate 4-epimerase 5;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 5 - Arabidopsis thaliana (Mouse-ear cress),
partial (89%)
Length = 1902
Score = 644 bits (325), Expect = 0.0
Identities = 745/885 (84%)
Strand = Plus / Plus
Query: 232 tgggagaagcgcgtcgccaagtcagctcgtcgcacttccgcctccggcctcaccgtcctc 291
||||| || |||||| |||| || || || |||| |||| ||||| |||||||||||||
Sbjct: 400 tgggaaaaacgcgtcaccaaatccgcccgccgcagttcctcctcctccctcaccgtcctc 459
Query: 292 gtcaccggcgctgcaggcttcgtcggcacacacgtatccttagcgctgaagcgccgcggt 351
||||||||||| || ||||||||||||| || || ||| | || | |||||||||||
Sbjct: 460 gtcaccggcgccgccggcttcgtcggcagccatgtctccctcgccttaaagcgccgcggc 519
Query: 352 gatggcgtcctcggtctcgacaacttcaaccgctactacgaccccaacctcaagcgcgcc 411
|| || |||||||| |||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 520 gacggtgtcctcggcctcgacaatttcaaccgctactacgaccctaacctcaaacgcgct 579
Query: 412 cgccagaggctcctcgaccgcgccggcgtgtttgtcgtctccggcgacgtcaacgacgct 471
||||||| ||| ||| ||||||||||| || |||||| || ||| ||||||| |
Sbjct: 580 cgccagaagcttctctcacgcgccggcgtcttcgtcgtcgagggagacatcaacgattca 639
Query: 472 gcgctactccggaagctcttcgacgttgtgccgtttactcacgtgatgcacctcgccgcg 531
||||||||| ||||||||||| || ||||| || || || || ||||||||||||||
Sbjct: 640 ccgctactccacaagctcttcgatgtggtgcctttcacccatgtcatgcacctcgccgct 699
Query: 532 caggctggggttcgctacgcgatgcagaaccctggatcgtacgtgcacagcaacatcgcc 591
|||||||||||||||||||| ||| | |||||| ||||| || |||||||||||||||
Sbjct: 700 caggctggggttcgctacgccatgaacaacccttattcgtatgtccacagcaacatcgcc 759
Query: 592 gggttcgtgaaccttctggaagcttgcaaatcggcgaacccgcaaccctccatcgtctgg 651
|| ||||| || ||||| |||||| |||||| || |||||||||||| |||| || |
Sbjct: 760 ggcttcgtcaatcttcttgaagctgccaaatcagccaacccgcaacccgccattgtttac 819
Query: 652 gcttcgtcgagctccgtttacggcttgaactcgaaggtcccgttctcggagaaggatcgg 711
|| || || ||||| |||||||| ||||| || ||||| |||||||| |||||||| |
Sbjct: 820 gcctcttctagctctgtttacgggttgaattccaaggttccgttctccgagaaggacaga 879
Query: 712 acggaccagcctgcgagcctctacgcggcgacgaagaaggccggcgaggaaatcgcccac 771
||||||||||| ||||| |||||||||||||||||||||||||| || | ||| || |||
Sbjct: 880 acggaccagccggcgagtctctacgcggcgacgaagaaggccggtgaagcaattgcgcac 939
Query: 772 acctacaaccacatctatggcctctcgatcaccgcgttgcggttcttcactgtttatgga 831
|| ||||| |||| |||||| | || | ||| | |||||||||||||| || |||||
Sbjct: 940 acttacaataacatttatggcttatccaccactggtttgcggttcttcacggtgtatggt 999
Query: 832 ccttggggaaggcctgacatggcgtatttcttcttcacgaaggatattctgaaggggaag 891
|||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1000 ccttggggtcgacctgacatggcgtatttcttcttcaccaaggatattctgaaggggaag 1059
Query: 892 caggtaacgatctttgaggcaccagatggtggaacagtggcgagggatttcacctacatt 951
||| | || ||||||| || || |||||||||| || || || || ||||||||||||
Sbjct: 1060 cagattactgtctttgaagcccctgatggtggaagcgttgctagagacttcacctacatt 1119
Query: 952 gatgatgttgtgaaggggtgtttgggggctttggatacggcgaagaagagtactggtagt 1011
||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 1120 gatgacattgtgaaggggtgtttaggggctctggatacggcgaagaagagtactggtagt 1179
Query: 1012 ggaggaaagaagaaggggccagctcagtttagggttttcaatttggggaacacttcgccg 1071
||||| |||||||||||||| || |||| |||| ||||||||||||||||||||||||||
Sbjct: 1180 ggaggtaagaagaaggggcctgcacagtataggattttcaatttggggaacacttcgccg 1239
Query: 1072 gtgccggtgactgagcttgttaagatattggagaagcttctgaag 1116
|||||||||| ||||||||| | |||||||||||||||||||||
Sbjct: 1240 gtgccggtgagtgagcttgtgagcatattggagaagcttctgaag 1284
>gnl|LJGI|BW612068 similar to UniRef100_Q9STI6 Cluster: UDP-glucuronate 4-epimerase 5;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 5 - Arabidopsis thaliana (Mouse-ear cress),
partial (21%)
Length = 473
Score = 549 bits (277), Expect = e-155
Identities = 277/277 (100%)
Strand = Plus / Plus
Query: 177 gccgccacccgccgcaccccgccgcgtcctcggcgactcatggggcggccctctttggga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gccgccacccgccgcaccccgccgcgtcctcggcgactcatggggcggccctctttggga 256
Query: 237 gaagcgcgtcgccaagtcagctcgtcgcacttccgcctccggcctcaccgtcctcgtcac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gaagcgcgtcgccaagtcagctcgtcgcacttccgcctccggcctcaccgtcctcgtcac 316
Query: 297 cggcgctgcaggcttcgtcggcacacacgtatccttagcgctgaagcgccgcggtgatgg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cggcgctgcaggcttcgtcggcacacacgtatccttagcgctgaagcgccgcggtgatgg 376
Query: 357 cgtcctcggtctcgacaacttcaaccgctactacgaccccaacctcaagcgcgcccgcca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cgtcctcggtctcgacaacttcaaccgctactacgaccccaacctcaagcgcgcccgcca 436
Query: 417 gaggctcctcgaccgcgccggcgtgtttgtcgtctcc 453
|||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaggctcctcgaccgcgccggcgtgtttgtcgtctcc 473
Score = 61.9 bits (31), Expect = 8e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 81 cagaatccactcatcactctccaggctcaca 111
|||||||||||||||||||||||||||||||
Sbjct: 101 cagaatccactcatcactctccaggctcaca 131
Score = 52.0 bits (26), Expect = 8e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 atgatggaggtgaatgagcaaacacc 26
||||||||||||||||||||||||||
Sbjct: 76 atgatggaggtgaatgagcaaacacc 101
>gnl|LJGI|BW614490 similar to UniRef100_Q9STI6 Cluster: UDP-glucuronate 4-epimerase 5;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 5 - Arabidopsis thaliana (Mouse-ear cress),
partial (21%)
Length = 455
Score = 391 bits (197), Expect = e-108
Identities = 197/197 (100%)
Strand = Plus / Plus
Query: 246 cgccaagtcagctcgtcgcacttccgcctccggcctcaccgtcctcgtcaccggcgctgc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cgccaagtcagctcgtcgcacttccgcctccggcctcaccgtcctcgtcaccggcgctgc 318
Query: 306 aggcttcgtcggcacacacgtatccttagcgctgaagcgccgcggtgatggcgtcctcgg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggcttcgtcggcacacacgtatccttagcgctgaagcgccgcggtgatggcgtcctcgg 378
Query: 366 tctcgacaacttcaaccgctactacgaccccaacctcaagcgcgcccgccagaggctcct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctcgacaacttcaaccgctactacgaccccaacctcaagcgcgcccgccagaggctcct 438
Query: 426 cgaccgcgccggcgtgt 442
|||||||||||||||||
Sbjct: 439 cgaccgcgccggcgtgt 455
Score = 220 bits (111), Expect = 1e-56
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 atgatggaggtgaatgagcaaacaccttcaacaccaggcaaattgaagccagataaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgatggaggtgaatgagcaaacaccttcaacaccaggcaaattgaagccagataaatct 123
Query: 61 ccctatattcaccaccgcttcagaatccactcatcactctccaggctcaca 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ccctatattcaccaccgcttcagaatccactcatcactctccaggctcaca 174
>gnl|LJGI|TC72474 similar to UniRef100_Q9STI6 Cluster: UDP-glucuronate 4-epimerase 5;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 5 - Arabidopsis thaliana (Mouse-ear cress),
partial (25%)
Length = 590
Score = 329 bits (166), Expect = 2e-89
Identities = 166/166 (100%)
Strand = Plus / Plus
Query: 951 tgatgatgttgtgaaggggtgtttgggggctttggatacggcgaagaagagtactggtag 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatgatgttgtgaaggggtgtttgggggctttggatacggcgaagaagagtactggtag 60
Query: 1011 tggaggaaagaagaaggggccagctcagtttagggttttcaatttggggaacacttcgcc 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaggaaagaagaaggggccagctcagtttagggttttcaatttggggaacacttcgcc 120
Query: 1071 ggtgccggtgactgagcttgttaagatattggagaagcttctgaag 1116
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgccggtgactgagcttgttaagatattggagaagcttctgaag 166
>gnl|LJGI|TC70758 similar to UniRef100_Q304Y2 Cluster: UDP-glucuronic acid 4-epimerase;
n=1; Zea mays|Rep: UDP-glucuronic acid 4-epimerase - Zea
mays (Maize), partial (94%)
Length = 2248
Score = 234 bits (118), Expect = 1e-60
Identities = 319/386 (82%)
Strand = Plus / Plus
Query: 484 aagctcttcgacgttgtgccgtttactcacgtgatgcacctcgccgcgcaggctggggtt 543
|||||||||||||| ||| |||| || || || |||||||||||||||||||| || ||
Sbjct: 644 aagctcttcgacgtggtggcgttcacccatgtcatgcacctcgccgcgcaggccggagtc 703
Query: 544 cgctacgcgatgcagaaccctggatcgtacgtgcacagcaacatcgccgggttcgtgaac 603
|||||||| ||| |||| ||| || ||||| |||||||||||||||| |||| | |
Sbjct: 704 cgctacgccatggagaatcctcattcctacgttcacagcaacatcgccgccctcgtcacc 763
Query: 604 cttctggaagcttgcaaatcggcgaacccgcaaccctccatcgtctgggcttcgtcgagc 663
|| ||||||| |||||||| || |||||||||||| | || ||||||||||| || |||
Sbjct: 764 ctcatggaagcctgcaaatctgcaaacccgcaacccgctattgtctgggcttcttcaagc 823
Query: 664 tccgtttacggcttgaactcgaaggtcccgttctcggagaaggatcggacggaccagcct 723
||||| ||||| | ||| |||||| ||||||||||| |||||||| ||||| ||
Sbjct: 824 tccgtctacggtctcaacgagaaggttccgttctcggaatccgatcggactgaccaaccc 883
Query: 724 gcgagcctctacgcggcgacgaagaaggccggcgaggaaatcgcccacacctacaaccac 783
|| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 884 gccagcctctacgccgcgacgaagaaagccggcgaggaaatcacccacacctacaaccat 943
Query: 784 atctatggcctctcgatcaccgcgttgcggttcttcactgtttatggaccttggggaagg 843
||||| || ||||| ||||||| |||| | |||||||| ||||| ||||| ||||| |
Sbjct: 944 atctacggactctccatcaccgggttgagattcttcaccgtttacggaccctggggccga 1003
Query: 844 cctgacatggcgtatttcttcttcac 869
|| |||||||| || |||| ||||||
Sbjct: 1004 cccgacatggcttacttctccttcac 1029
Score = 79.8 bits (40), Expect = 3e-14
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 284 ccgtcctcgtcaccggcgctgcaggcttcgtcggcacacacgtatccttagcgctgaagc 343
||||||||||||||||||| || |||||||||||| ||||||| ||| | || ||||
Sbjct: 444 ccgtcctcgtcaccggcgccgccggcttcgtcggctcacacgtttccctcgccttgaaaa 503
Query: 344 gccgcggtgatggcgtcctcggtctcgacaacttcaaccgctactacgaccc 395
| || || || |||||| |||| ||||||||||||||| ||||||||||||
Sbjct: 504 ggcgaggcgacggcgtcgtcgggctcgacaacttcaacgactactacgaccc 555
>gnl|LJGI|TC61079
Length = 800
Score = 115 bits (58), Expect = 6e-25
Identities = 133/158 (84%)
Strand = Plus / Plus
Query: 934 agggatttcacctacattgatgatgttgtgaaggggtgtttgggggctttggatacggcg 993
|||||||| || ||||||||||| |||||| ||| || ||||| || |||||||| |||
Sbjct: 17 agggattttacttacattgatgacattgtgaggggctgcttgggtgcgttggataccgcg 76
Query: 994 aagaagagtactggtagtggaggaaagaagaaggggccagctcagtttagggttttcaat 1053
||||||| ||||| ||||| || |||||||||||||| || ||||| ||||| ||||||
Sbjct: 77 gagaagagcactggcagtggcgggaagaagaaggggccggcgcagttgagggtgttcaat 136
Query: 1054 ttggggaacacttcgccggtgccggtgactgagcttgt 1091
||||||| ||||| || || ||||||| |||||||||
Sbjct: 137 ctggggaatacttctcctgtcccggtgagtgagcttgt 174
>gnl|LJGI|TC75938 similar to UniRef100_A7Q721 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 799
Score = 89.7 bits (45), Expect = 3e-17
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 453 cggcgacgtcaacgacgctgcgctactccggaagctcttcgacgttgtgccgtttactca 512
||||||| |||||||||| |||| ||| ||||||||||| || ||||| || |||||
Sbjct: 643 cggcgacatcaacgacgcgccgctgctcaccaagctcttcgatgtggtgcccttcactca 702
Query: 513 cgtgatgcacctcgccgcgcaggctggggttcgctacgcgatgcagaaccctggatcgta 572
||| | |||||||||||||| || || ||||||||||| |||||||||||| ||||||
Sbjct: 703 cgtcctccacctcgccgcgcaagccggtgttcgctacgcaatgcagaaccctcaatcgta 762
Query: 573 cgtgcaca-gcaacatcgccgggttcgtgaaccttct 608
| | || | ||||||||| |||||||||||||||||
Sbjct: 763 cat-cagatccaacatcgctgggttcgtgaaccttct 798
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 284 ccgtcctcgtcaccggcgctgcaggcttcgtcggcacacac 324
||||||||||||||||||| | ||||||||||||||||||
Sbjct: 474 ccgtcctcgtcaccggcgcagtcggcttcgtcggcacacac 514
>gnl|LJGI|TC81011 similar to UniRef100_Q9LIS3 Cluster: UDP-glucuronate 4-epimerase 6;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 6 - Arabidopsis thaliana (Mouse-ear cress),
partial (33%)
Length = 520
Score = 60.0 bits (30), Expect = 3e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 983 tggatacggcgaagaagagtactggtagtggaggaaagaagaaggggccagctcagttta 1042
|||| |||||| ||||||| || || || || || |||||||||||||| || ||||| |
Sbjct: 133 tggacacggcggagaagagcaccggcagcggcgggaagaagaaggggccggcgcagttga 192
Query: 1043 gggttttcaatttggggaacacttcgccggtgccggtg 1080
| || | ||| | ||||||||||||||||||||||||
Sbjct: 193 gagtgtacaacctcgggaacacttcgccggtgccggtg 230