Miyakogusa Predicted Gene

Lj4g3v1288440.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1288440.1 BP035884.path2.1
         (316 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP035884 similar to UniRef100_O49665 Cluster: Predicted...   573   e-163
gnl|LJGI|DC598547 weakly similar to UniRef100_O49665 Cluster: Pr...    56   1e-07

>gnl|LJGI|BP035884 similar to UniRef100_O49665 Cluster: Predicted protein; n=1;
           Arabidopsis thaliana|Rep: Predicted protein -
           Arabidopsis thaliana, partial (3%)
          Length = 510

 Score =  573 bits (289), Expect = e-163
 Identities = 307/316 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtttgcagactgcaatgatgtcgttgacggggttcggtcttgttctgatttggagcaa 60
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 400 atgtttgcagactgcnatgatgtcgttgacggggttcggtcttgttctgatttggagcna 341

                                                                       
Query: 61  aagaggaaagggcgagacaaaacaaagcacctgaaaggtatggctttagatgtatatagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aagaggaaagggcgagacaaaacaaagcacctgaaaggtatggctttagatgtatatagt 281

                                                                       
Query: 121 gctctcgcccatagcgatcactatagtactgctgaagctatcctaaggatcaacaactgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gctctcgcccatagcgatcactatagtactgctgaagctatcctaaggatcaacaactgg 221

                                                                       
Query: 181 cagaagagtaatatcacgtcatctgttgatgttgaagtgattttannnnnnnataatttt 240
           |||||||||||||||||||||||||||||||||||||||||||||       ||||||||
Sbjct: 220 cagaagagtaatatcacgtcatctgttgatgttgaagtgattttatttttttataatttt 161

                                                                       
Query: 241 aagaacctcacaagcgggttagtgatcaacaaaaccatcattagtgacgtgagtttttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aagaacctcacaagcgggttagtgatcaacaaaaccatcattagtgacgtgagtttttct 101

                           
Query: 301 tcttctagttattgaa 316
           ||||||||||||||||
Sbjct: 100 tcttctagttattgaa 85


>gnl|LJGI|DC598547 weakly similar to UniRef100_O49665 Cluster: Predicted protein; n=1;
           Arabidopsis thaliana|Rep: Predicted protein -
           Arabidopsis thaliana (Mouse-ear cress), partial (17%)
          Length = 469

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 41  cttgttctgatttggagcaaaagaggaaagggcgagacaaaacaaagcacctgaaa 96
           |||||||||||||||  |||| || ||||| || |||||||||| |||||||||||
Sbjct: 217 cttgttctgatttggtccaaaggaagaaagagcaagacaaaacacagcacctgaaa 272