Miyakogusa Predicted Gene
- Lj4g3v1287420.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1287420.2 tr|G7LGI2|G7LGI2_MEDTR Tyrosyl-DNA
phosphodiesterase OS=Medicago truncatula GN=MTR_8g095490 PE=4
SV=,72.16,0,Phospholipase D/nuclease,NULL; SMAD/FHA domain,SMAD/FHA
domain; FHA_DOMAIN,Forkhead-associated (FHA),CUFF.48767.2
(3153 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76275 weakly similar to UniRef100_A7P2B3 Cluster: Chr... 928 0.0
gnl|LJGI|TC58278 weakly similar to UniRef100_A7Q1E1 Cluster: Chr... 54 5e-06
>gnl|LJGI|TC76275 weakly similar to UniRef100_A7P2B3 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 562
Score = 928 bits (468), Expect = 0.0
Identities = 471/472 (99%)
Strand = Plus / Plus
Query: 6 cgattccgattccgattccgattccactcccaacaagaagcagagaaccaccgtcgtatt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 cgattccgattccgattccgattccactcccaacaagaagcagagaaccaccgtcgtatt 150
Query: 66 gaaccatttcgatgtccctctgatttcctccgcctccaacggcgtcgtttcgccctgcga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gaaccatttcgatgtccctctgatttcctccgcctccaacggcgtcgtttcgccctgcga 210
Query: 126 ctccatgcgcctccacgcggactacccgtactcgatcggccgaaaacctcgcgactgcga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ctccatgcgcctccacgcggactacccgtactcgatcggccgaaaacctcgcgactgcga 270
Query: 186 cttcgtcttccatgaccgccgcgtcagcaagcgccatggccagatcttcttcgacggttc 245
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 271 cttcgtcttccatgaccgccgcgtcagcaagcgccattgccagatcttcttcgacggttc 330
Query: 246 cctccgcaagctctaccttctgagcggagttctgtcaaatagcgattgctctaccatcac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cctccgcaagctctaccttctgagcggagttctgtcaaatagcgattgctctaccatcac 390
Query: 306 caccaacgctcatcttgttcacgagttccggaaaagggtagtgatggggtctcgcggcag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caccaacgctcatcttgttcacgagttccggaaaagggtagtgatggggtctcgcggcag 450
Query: 366 tgaccgtattccgtttcgagaagcttccaacggggttttcgtgaacggagtcgagatcgg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgaccgtattccgtttcgagaagcttccaacggggttttcgtgaacggagtcgagatcgg 510
Query: 426 gaagggaatggcggtggagttatcggctggagatagggtttcgttggtttgt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaagggaatggcggtggagttatcggctggagatagggtttcgttggtttgt 562
>gnl|LJGI|TC58278 weakly similar to UniRef100_A7Q1E1 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (98%)
Length = 799
Score = 54.0 bits (27), Expect = 5e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 4 atcgattccgattccgattccgattcc 30
|||||||||||||||||||||||||||
Sbjct: 128 atcgattccgattccgattccgattcc 102