Miyakogusa Predicted Gene
- Lj4g3v1286240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1286240.1 Non Chatacterized Hit- tr|D5A8X0|D5A8X0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,46.15,0.0000000000009,LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER
1,NULL; N-terminal domain of CBF1 interacting
co-rep,CBF1-in,CUFF.48759.1
(654 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76735 similar to UniRef100_A7PR63 Cluster: Chromosome... 569 e-162
gnl|LJGI|BP030006 similar to UniRef100_A7PR63 Cluster: Chromosom... 62 5e-09
gnl|LJGI|BI419494 weakly similar to UniRef100_A7Q0N5 Cluster: Ch... 54 1e-06
>gnl|LJGI|TC76735 similar to UniRef100_A7PR63 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 471
Score = 569 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Plus
Query: 1 atgggtggtcacggcggccttaacatcctccctcagaagcgatggaacgtatacaatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgggtggtcacggcggccttaacatcctccctcagaagcgatggaacgtatacaatttc 126
Query: 61 gacaaccgagagaaagttcgccgcgacgaggaggaagccgccaaagaggaacagcttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gacaaccgagagaaagttcgccgcgacgaggaggaagccgccaaagaggaacagcttaag 186
Query: 121 cgcgagcaggcgcgaaaacgcgacaccgagttccgtctcgagcgcctccgcaccgctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgcgagcaggcgcgaaaacgcgacaccgagttccgtctcgagcgcctccgcaccgctaaa 246
Query: 181 ggtttagcaccgtcgattccgccgcctccagaatcgtcagaacccgaggtggctgcggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtttagcaccgtcgattccgccgcctccagaatcgtcagaacccgaggtggctgcggat 306
Query: 241 ccgggtcacatcaacctcttcgaagggatcaagattttcgacccggt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccgggtcacatcaacctcttcgaagggatcaagattttcgacccggt 353
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 359 ttcgtgttgtgggtcctgaggatgagaagtataggttgggttatggg 405
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttcgtgttgtgggtcctgaggatgagaagtataggttgggttatggg 471
>gnl|LJGI|BP030006 similar to UniRef100_A7PR63 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 487
Score = 61.9 bits (31), Expect = 5e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 624 tgtttacagaagtagtaggttctccaggaga 654
|||||||||||||||||||||||||||||||
Sbjct: 343 tgtttacagaagtagtaggttctccaggaga 313
>gnl|LJGI|BI419494 weakly similar to UniRef100_A7Q0N5 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 449
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 458 atgttgatgatgatgttgatgatggtg 484
|||||||||||||||||||||||||||
Sbjct: 241 atgttgatgatgatgttgatgatggtg 267