Miyakogusa Predicted Gene

Lj4g3v1273700.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1273700.1 tr|G7JW23|G7JW23_MEDTR Sec14 cytosolic factor
OS=Medicago truncatula GN=MTR_5g012460 PE=4
SV=1,55.84,0,CRAL_TRIO_N,CRAL/TRIO, N-terminal domain; SEC14 CYTOSOLIC
FACTOR-RELATED,NULL; SEC14 RELATED PROTEIN,gene.g54377.t1.1
         (1116 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67589 similar to UniRef100_Q2HUF5 Cluster: Tetratrico...   159   5e-38
gnl|LJGI|FS319160 similar to UniRef100_Q9FGK6 Cluster: Similarit...   119   4e-26
gnl|LJGI|BP028539                                                      58   1e-07

>gnl|LJGI|TC67589 similar to UniRef100_Q2HUF5 Cluster: Tetratricopeptide-like helical;
            n=1; Medicago truncatula|Rep: Tetratricopeptide-like
            helical - Medicago truncatula (Barrel medic), partial
            (14%)
          Length = 1875

 Score =  159 bits (80), Expect = 5e-38
 Identities = 106/112 (94%), Gaps = 2/112 (1%)
 Strand = Plus / Plus

                                                                        
Query: 742  agcaatttgcctacttttcttggtggtgactgcacatgttctgaatatggaggttgcctt 801
            |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1213 agcaatttgcctacttttctcggtggtgactgcacatgttttgaatatggaggttgcctt 1272

                                                                
Query: 802  atgagcgatcgagggccctggaaaaatcaagaatttttagaaatgattcagg 853
            |||||||||| |||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 1273 atgagcgatc-agggccttggaaaaa-caagaacttttagaaatgattcagg 1322


>gnl|LJGI|FS319160 similar to UniRef100_Q9FGK6 Cluster: Similarity to
           phosphatidylinositol/phosphatidylcholine transfer
           protein; n=1; Arabidopsis thaliana|Rep: Similarity to
           phosphatidylinositol/phosphatidylcholine transfer
           protein - Arabidopsis thaliana (Mouse-ear cress),
           partial (6%)
          Length = 741

 Score =  119 bits (60), Expect = 4e-26
 Identities = 66/68 (97%)
 Strand = Plus / Plus

                                                                       
Query: 744 caatttgcctacttttcttggtggtgactgcacatgttctgaatatggaggttgccttat 803
           |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 666 caatttgcctacttttctcggtggtgactgcacatgttttgaatatggaggttgccttat 725

                   
Query: 804 gagcgatc 811
           ||||||||
Sbjct: 726 gagcgatc 733


>gnl|LJGI|BP028539 
          Length = 414

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 979  gaggagagagctcgtgcgatgacagactcatcatgtaggttagcattgcaaaagattgat 1038
            |||||||||||  |||| |  |||||||||| ||||||||||||||||||  | || |||
Sbjct: 345  gaggagagagcatgtgccagaacagactcattatgtaggttagcattgcagcatatagat 286

                             
Query: 1039 cagcttgaagctgctct 1055
              |||||||||||||||
Sbjct: 285  atgcttgaagctgctct 269



 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 57/66 (86%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                       
Query: 896 gtgatgaggcttcagaagattccttgatgccaaaaaatgttgacatgcaaaatgaaaatg 955
           |||||||||||| ||||||||||||| ||||   ||| ||||| ||||||||| ||||||
Sbjct: 413 gtgatgaggctttagaagattccttggtgcc-cgaaaggttgatatgcaaaattaaaatg 355

                 
Query: 956 acttta 961
            |||||
Sbjct: 354 ccttta 349