Miyakogusa Predicted Gene

Lj4g3v1273520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1273520.1 Non Chatacterized Hit- tr|I1K5E0|I1K5E0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,23.68,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat;
PENTAT,NODE_22088_length_1612_cov_9.753722.path2.1
         (1564 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW623714 weakly similar to UniRef100_A7R3M9 Cluster: Ch...   940   0.0  

>gnl|LJGI|BW623714 weakly similar to UniRef100_A7R3M9 Cluster: Chromosome chr2
           scaffold_541, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_541, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (22%)
          Length = 486

 Score =  940 bits (474), Expect = 0.0
 Identities = 474/474 (100%)
 Strand = Plus / Plus

                                                                       
Query: 231 cattcgaaccgccactgacctgggcagtcactcattcggacaacagctccacagtcatgt 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13  cattcgaaccgccactgacctgggcagtcactcattcggacaacagctccacagtcatgt 72

                                                                       
Query: 291 cttacgttctggccattgctcacatgcctatgtcttctcttccctcatcagattctatgt 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  cttacgttctggccattgctcacatgcctatgtcttctcttccctcatcagattctatgt 132

                                                                       
Query: 351 cagcatgcactctttcagtgatgcccacacactgtttgttgaaaatcctcaaccaaacgt 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cagcatgcactctttcagtgatgcccacacactgtttgttgaaaatcctcaaccaaacgt 192

                                                                       
Query: 411 tgtttcttggaacactttgatttctgggtatgtccatgccggccagtttcgagacgcgtt 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgtttcttggaacactttgatttctgggtatgtccatgccggccagtttcgagacgcgtt 252

                                                                       
Query: 471 gtcggttttcacgcgcctagaaaggtcccacatttgtgatgctgatgcattctccttcac 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gtcggttttcacgcgcctagaaaggtcccacatttgtgatgctgatgcattctccttcac 312

                                                                       
Query: 531 ctctgctctggctgcttgtgcacagcttagtctgttgaatctgggaagctcaattcatgc 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctctgctctggctgcttgtgcacagcttagtctgttgaatctgggaagctcaattcatgc 372

                                                                       
Query: 591 caagatggtgaaattgggcatggttggtggcactgttgttgcaaattgcttgattgacat 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 caagatggtgaaattgggcatggttggtggcactgttgttgcaaattgcttgattgacat 432

                                                                 
Query: 651 gtatgggaaatgcgggtgtgttgaacatgctgttaggatattctctgagatcat 704
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtatgggaaatgcgggtgtgttgaacatgctgttaggatattctctgagatcat 486