Miyakogusa Predicted Gene
- Lj4g3v1260340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1260340.1 tr|I1MGV6|I1MGV6_SOYBN 60S ribosomal protein L27
OS=Glycine max GN=Gma.55267 PE=3 SV=1,88.15,0,RIBOSOMAL_L27E,Ribosomal
protein L27e, conserved site; no description,Translation protein
SH3-like, ,CUFF.48726.1
(409 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66478 similar to UniRef100_Q05462 Cluster: 60S riboso... 285 1e-76
gnl|LJGI|TC67253 homologue to UniRef100_Q05462 Cluster: 60S ribo... 196 7e-50
>gnl|LJGI|TC66478 similar to UniRef100_Q05462 Cluster: 60S ribosomal protein L27;
n=1; Pisum sativum|Rep: 60S ribosomal protein L27 -
Pisum sativum (Garden pea), complete
Length = 662
Score = 285 bits (144), Expect = 1e-76
Identities = 342/408 (83%)
Strand = Plus / Plus
Query: 1 atggtgaagtttctgaagccaaacaaggccgtgatcctgctacagggtcgctacgccggc 60
|||||||| || || ||||||||||||||||| ||| | || ||||| ||||||||||||
Sbjct: 46 atggtgaaattcctcaagccaaacaaggccgttatcgtcctgcagggacgctacgccggc 105
Query: 61 aagaaggcggtgatcgtgaaaaccttcgacgacggaacgcacggccgcccctacggccac 120
||||||||||||||||| |||||||| || ||||| | || ||||||||| ||||||
Sbjct: 106 aagaaggcggtgatcgtccgcaccttcgatgaaggaacccgcgaccgcccctatggccac 165
Query: 121 tgtctcgtcgccggaatcaagaagtacccgagcaaggtgatcaagaaggactcggcgaag 180
||||||||||||||||||||||||||||| |||||||||||| |||||| | |||
Sbjct: 166 tgtctcgtcgccggaatcaagaagtaccctagcaaggtgatccgcaaggacaacaccaag 225
Query: 181 aagacggggaagaaatcgcgcgtgaaggcgttcatgaagctcgtgaactaccagcatctc 240
||||||| |||||| ||||| |||||||| ||| |||||||||| ||||||||||| |||
Sbjct: 226 aagacggcgaagaagtcgcgtgtgaaggccttcgtgaagctcgtcaactaccagcacctc 285
Query: 241 atgcccacgcgctacaccctcgatgtcgacctcaaggacgcagtctccactaacgccctc 300
||||| ||||| ||||| ||||| || || || || || || |||||||| | | ||
Sbjct: 286 atgccgacgcgttacactctcgacgttgatctgaaagatgctgtctccaccgatgtgctt 345
Query: 301 gtttccaaggaccagaaggttactgctctcaaggagactaagaagcgatttgaggagaga 360
| ||||| ||||| | |||||||||||||||||||||||||| || |||||| |
Sbjct: 346 caggctaaggataagaagatcactgctctcaaggagactaagaagcgtttggaggagcgt 405
Query: 361 ttcaaaactggtaagaataggtggttcttcaccaagctcaggttctga 408
||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 406 ttcaagactgggaagaacaggtggttcttcaccaagctcaggttctga 453
>gnl|LJGI|TC67253 homologue to UniRef100_Q05462 Cluster: 60S ribosomal protein L27;
n=1; Pisum sativum|Rep: 60S ribosomal protein L27 -
Pisum sativum (Garden pea), complete
Length = 583
Score = 196 bits (99), Expect = 7e-50
Identities = 321/395 (81%)
Strand = Plus / Plus
Query: 1 atggtgaagtttctgaagccaaacaaggccgtgatcctgctacagggtcgctacgccggc 60
||||||||||| ||||||| |||||||| |||||| |||| || || || ||||| ||
Sbjct: 30 atggtgaagttcttgaagccgaacaaggctgtgatcgtgctgcaagggcggtacgcaggg 89
Query: 61 aagaaggcggtgatcgtgaaaaccttcgacgacggaacgcacggccgcccctacggccac 120
|||||||||||||||| || || || || || || | | ||| ||||||| |||
Sbjct: 90 cggaaggcggtgatcgtgcgcacatttgatgaggggactcgtgatcgcgcctacggacac 149
Query: 121 tgtctcgtcgccggaatcaagaagtacccgagcaaggtgatcaagaaggactcggcgaag 180
|| || || || || || ||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 150 tgcctggttgcagggattaagaagtacccgagcaaggtgattaagaaggactctgccaag 209
Query: 181 aagacggggaagaaatcgcgcgtgaaggcgttcatgaagctcgtgaactaccagcatctc 240
||||||| |||||||||| | |||||||||||| |||||||||||||||||||||| ||
Sbjct: 210 aagacggcgaagaaatcgagggtgaaggcgttcgtgaagctcgtgaactaccagcacctg 269
Query: 241 atgcccacgcgctacaccctcgatgtcgacctcaaggacgcagtctccactaacgccctc 300
|||||||| ||||||||||| ||||| || || ||||||| || || | |||||
Sbjct: 270 atgcccactcgctacacccttgatgtagatctgaaggacgttgttgttcctgattccctc 329
Query: 301 gtttccaaggaccagaaggttactgctctcaaggagactaagaagcgatttgaggagaga 360
|| |||||| ||||||| |||||||||| ||||| |||||||| || ||||| ||
Sbjct: 330 caatcgaaggacaagaaggtcgctgctctcaaagagaccaagaagcgcttggaggaaagg 389
Query: 361 ttcaaaactggtaagaataggtggttcttcaccaa 395
|||||||| ||||| || |||||||||||||||||
Sbjct: 390 ttcaaaaccggtaaaaacaggtggttcttcaccaa 424